Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03305 ATGCATGGTTCTCGAAATGTCTGGAAACTGGAATACTACACGACCTCAGGTCCCACCAGCTGGTGCTGCCGACTAAGCAATCCATATCATACTTTCCAGAACTCTCCATCACTCGTTTCCAAATTTGTATATATTTCACAAACTAAACATTCTTACTTCATCAAAAAAACAAGCACCAATACTCTTCACCTCTCGAGTCTCGACAAGAAAATGTCACAAACATTATCCTCAAATATTGGTCTTAATTACCAAGCCATAATTTCCAAGACTTCATTGAAACCAACTCACTTCCCTTCATTACAAAAGCTGAAACCCCTCAGAGCCATGACAGAAGACGCAAGAGAAAAACTCGACCATGTCCCAATATCAAACCACCAGCCTCAACTCAAAAAGAGACTAGTTCCTTTTCCTTCCATACCGACATGGGACCGGTTTCCTACGGCGAGAACGGTTCAAGAGATGTTGGAAACAATGGAAAGAATGATGGAGGATCCATTTGCAATGAGCACGATTGAGTGGCCTTCATCACCTCTACCGAGTGAAGGAGTAGGTGGGTATAGAAGGAGGGGAAGAGCACCATGGGAGATTAAAGAAGGAGAAGAAGAATACAAGCTGAGGTTTGATATGCCTGGTATGAACAAGGAGGATGTGAAAGTGTGGGTGGAAGAGAAGATGGTAGTGGTTAAAGCTGAAAAAGGTTCCAACAAGAAGAAGAACGAAGAAGATGAAGAATGGGGTTCAAATAGCTATGGTAGGTATAGTGGTAGAATTGCTTTGCCGGAGAATGTGAAGTTTGAGGATATTAAGGCTGAGGTTAAGGATGGTGTTCTTTACATAACCATTCCTAAGGTTGTTAGCTATTCCAAAGTTATGGATATCAGTGTTCAATAA 891 0.4175 MHGSRNVWKLEYYTTSGPTSWCCRLSNPYHTFQNSPSLVSKFVYISQTKHSYFIKKTSTNTLHLSSLDKKMSQTLSSNIGLNYQAIISKTSLKPTHFPSLQKLKPLRAMTEDAREKLDHVPISNHQPQLKKRLVPFPSIPTWDRFPTARTVQEMLETMERMMEDPFAMSTIEWPSSPLPSEGVGGYRRRGRAPWEIKEGEEEYKLRFDMPGMNKEDVKVWVEEKMVVVKAEKGSNKKKNEEDEEWGSNSYGRYSGRIALPENVKFEDIKAEVKDGVLYITIPKVVSYSKVMDISVQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03305 296 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 87 296 IPR044587 GO:0009408
Vivi3g03305 296 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 185 296 IPR002068 -
Vivi3g03305 296 Pfam Hsp20/alpha crystallin family 195 296 IPR002068 -
Vivi3g03305 296 SUPERFAMILY HSP20-like chaperones 177 286 IPR008978 -
Vivi3g03305 296 Gene3D - 145 295 IPR008978 -
Vivi3g03305 296 CDD ACD_sHsps-like 195 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03305 Vivi-Chr3 55899464 55900612 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03305 K13993 - gmx:100811966 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03305 3 55899464 55900612 Vivi3g03305 3 55899464 55900612 ECH