Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03293 ATGGCTTCGTATTCCGAACAAGATGGAAAGCCTCTACCGAAATTCGGAGACTGGGATGTAAACGATCCCGCCTCAGCTGAAGGGTTTACTGTTATATTCAACAAGGCTAGAGACGAGAAGAAAATTGCATCTGCTTCTGGACGTTTTCCTTCGCAACGAAGATACGACTCTCGCGGTCGCAACAACAAGAATAATAAAAACACAAAGACCTCATCTAAGAAAAAGTGGTTTTGCTTTAGTGCTTAG 246 0.4309 MASYSEQDGKPLPKFGDWDVNDPASAEGFTVIFNKARDEKKIASASGRFPSQRRYDSRGRNNKNNKNTKTSSKKKWFCFSA 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03293 81 MobiDBLite consensus disorder prediction 1 21 - -
Vivi3g03293 81 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Vivi3g03293 81 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 78 IPR040387 -
Vivi3g03293 81 MobiDBLite consensus disorder prediction 43 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03293 Vivi-Chr3 55771403 55772424 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03293 - - cam:101496666 131.724