Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03266 ATGGAGGAGTGGCAGGAGGTGCTACTAAGCAATGCAAGCCCTTTGGTTTCTTCAGTTCGCTTCAGCAAGTCTGATGAAAAGCGGCTTTCTTTATTTACCGGGACAAAAACTCTCCACTTGAGGTGTGTATCGAGAGAAGACAGAGCCATGTGGATTGAAGCCTTGCAATCTGCAAAAGATCTTTTTCCTAGAGCTCTGACAAGCAGTGATCTTGCTACTCCAGAAGATATCGTGGTTTCGACAGAGAAACTCCGATCAAAGTTATCTCAGGAAGGCATAAGTGAGGAAATCATCAATGACTGTGAATCCATTATGCTCTCTGAAGTCTCATATCTACAAGGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTGAAACAGTTGGAGACGGAGAAAATAGAGCTGGAAACTACTGTAGTAGATGAAACAAAGGAACGTGAGTCTTATTGCGGACAAGGGAATAGAAGATTTAGTGATTTCTATTCTGTTATGTCGGAAGGCAGTGCTACAGATTCAGTAGCTGATAATGAAAGTCAAGATGGAGCAGATGCTGAAACAGACGATGACGATGGAACATATTTTGATACAAATGAGATTTTATATTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGAGAAGGTACGGGAAATGCCAGTATATCTGATAGAGATTATGTTCACCATGATAGTTTGCATGGGTTTGAGAGGCCAATCAAAGATATAAGTTATCCTTGTGTCAAAAGAAGGGATAATCTGCCAGAACCAAAAGAGAAAGAGAAACCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAATGTTTTGAAGACCTGGAGTACTCAAACCTGGTTGATAGAGCATGTGAGTGGGGAAAGCAGGGAAATGAATTGATGAGAATTCTAAATATTGCAGCATTTGCTGTGTCTGGCTATGCGTCCACTGAAGGTCGACAGTGTAAACCCTTCAATCCGCTACTTGGGGAGACTTACGAAGCTGACTATCCTGATAAAGGAGTTAAATTTTTTTCTGAGAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGGTGGAAGTTTTGGGCAGACTCCAATTTAAAAGGAAAGTTCTGGGGGCGTTCTATCCAGTTAGATCCTGTGGGTGTTCTCACTCTTCAGTTTGAAGACGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATTTACAATATTATACTGGGTAAAATTTATTGTGACCACTATGGTACGATGCACATCAAGGGCAGCGGAAACTACTCTTGCAAACTGAAGTTTAAAGAGCAATCAATTATTGACCGGAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGCTAATTGGAAAGTGGGACGAAGCAATGTACTATGTACTTGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCAATGACGGAAGCTGCATTATTGTGGGAAAGGGACAACTATGTCCCCAAGACGAGATATAACCTCTCTCCCTTTGCAATTTCCTTGAATGAAATAATGCCCGGTTTATTGGAAAAGTTGCCTCCAACCGACTCAAGGCTGAGACCAGATCAAAGACATTTAGAAAATGGAGACTATGAATTTGCAAATGCCGAGAAACTAAGGCTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCAAGATGGTTTAAGAAGGATGAGGATGGTTCTTACCGATACATGGGTGGTTATTGGGAGGCAAGAGAAAAAAACAATTGGGATGAAATCCCTAATATATTTGGACAAGGTTGTGATTTGCCTTCATGTTCCGAAGACACTGTATCCTACTGA 1953 0.4153 MEEWQEVLLSNASPLVSSVRFSKSDEKRLSLFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSKLSQEGISEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADAETDDDDGTYFDTNEILYSDALRSASYRSREGTGNASISDRDYVHHDSLHGFERPIKDISYPCVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSNLVDRACEWGKQGNELMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNYVPKTRYNLSPFAISLNEIMPGLLEKLPPTDSRLRPDQRHLENGDYEFANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGSYRYMGGYWEAREKNNWDEIPNIFGQGCDLPSCSEDTVSY 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03266 650 Coils Coil 116 150 - -
Vivi3g03266 650 FunFam Oxysterol-binding protein-related protein 2A 566 636 - -
Vivi3g03266 650 Gene3D - 566 633 - -
Vivi3g03266 650 ProSiteProfiles PH domain profile. 1 60 IPR001849 -
Vivi3g03266 650 SUPERFAMILY Oxysterol-binding protein-like 264 635 IPR037239 -
Vivi3g03266 650 Coils Coil 577 597 - -
Vivi3g03266 650 Pfam Pleckstrin homology domain 4 57 - -
Vivi3g03266 650 Pfam Oxysterol-binding protein 270 623 IPR000648 GO:0008289
Vivi3g03266 650 MobiDBLite consensus disorder prediction 173 197 - -
Vivi3g03266 650 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 21 622 IPR000648 GO:0008289
Vivi3g03266 650 SUPERFAMILY PH domain-like 23 62 - -
Vivi3g03266 650 MobiDBLite consensus disorder prediction 183 197 - -
Vivi3g03266 650 Gene3D - 355 521 - -
Vivi3g03266 650 FunFam oxysterol-binding protein-related protein 1D isoform X1 355 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03266 Vivi-Chr3 55327658 55335234 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03266 K20456 - gmx:100817856 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03266 3 55327658 55335234 Vivi3g03266 3 55327658 55335234 ECH