Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03250 ATGACGACGGCGATGACGGAAAAAGTGAGACTCCGATTGTTCTTCGACGATCCCAACATGCTCAGTAAGTCAAAGACGAACCAAGGCTTGAACCGTTGCTGGTTCCTTCTAAAACCCCACCTCACCACCATTTCCGATCTCACCTCTCACCTCCAAACCCTTTTCCGCCTCCACCGCACCTCTCCCGCCGGCATCACTCTTTCGATGGATGGTTTTGTTTTACCATCGTTTGAGTCTACTTGTATTTTGAAGGATAAAGACATTGTGTGTGTGAGAAGAAAGGGAAGTAGTTTAACTGATGGTAAACCTGCAATGCTGCCATTAGAAGCTTGTGAGAATCGGTCTACTGAGGCTCTGGAGCTTCTTGCAATTGAGGGGATTCAAGAGGAGAGGCGAGAATATGAAACTGTTAACCTAGATGATGATGATGATGATGTTGATAATGATCAAACTGAAGATGTGGTTTATGTGGAAGCTAAATCGGATGGGAATACAACTTCAAAGAAGAGAAAGGCGTCCAAGAAGCTTAAGAGCCCTAGTCAGAAGAAGATTAAGATGTCTACCACGGATAACTTATCAGTCATTCCGGAGGTCAATGATGAGGAAAATGGAAGTTTGAAAGACGGTGCTCACCGCCAGCCAAGTCCTGCCAAGAAGTCATCAAAAAAGTTGTCAAAAAAGTCTAGCAACCGTGATTTAATTAAACAAAAAGATGACCAAAATGGGTCAACAAGCGATGAAACAAGGTCTCTTCAGCCTCAAGGTGAAGGCGAAACTAAAAAGTTGCCTAGCAGAAGTGCTCGGCGGAAAAAGGCCAAAAGAAAGTGGTTGAGGGAACTAAAATTAAAGGAGAAAGAGAAAGAGAATGAGAATGAGAACGAGAAGGAGAAGGTGCTTGAAAAAGATGATCCACAATTACCTACCAAAGATAAGAATTGCATAGTTGCTGATGTGCTTCAACAATCCGATGAAGAAAGTGAAGCAGATGACGACATGGTTCCTGTGGAGATCAAGCCAGGGCACATTCGGTTTCAGTCCCGTGGAAAAGATAAGGCAGTGCCAGAGAATCAGTTCCCAGTGGACACATTTCAGTGGAGTGGTACTACCAGCAAGAAGAAGGGTCAGAAATGGGGTAAAGAGAGGACCTCATCCCATAAACAGGATGATTATGAGCAGCCCCGTCAAGATTTTCCTACTGTTCAGAATGCTGGGAAAAAAAACACATTTGACGCAGTAGATTTTGAAAAGCTTACACCTTACACAGACTTGCCAAAGGAAGGAAATGTTATTGCTTATCGATTGATTGAGTTATCAGAATCTTGGACTCCTGAGATCTCCTCCTTCAGAGTTGGTAAAGTAACACAGTTTGACAGTAAATCAAACAGGATATGGCTAGAGACAGTTTCAGAATATCCATTTGACTTTAGGAAGAAAATAGATGACCTAGACGACGATGCAACACCTGCACAGTACGATCCTTCCCCTTATCAGGAAGATGGTTCTTTAGAGATTGATTATGTATCTCTTGCTGATGTTCGAATTATTAAGCATGGCCACTCGAATTTGGCAACTGTAGTTGCTTCTAATGATGCTTTAGTAACTCCATCAAAAGCAACTAACAGAAGTACTGATGCTTTGGTAACTCCAACAAAAGCAACCAACAATAGCACTGTTGAAAAACATGTTGGTAATCAAACTCCTGTTGGAAGCTCGAAGCCACAAAAGGAGGGCCATACCCCTGCTAAAGAAAACGGGGAAGTTAACGTTTGGGATGAAATCAACGAAGCATTAAAAGCAAAGAAGGCCCGGCTGTCGCAGGGGGATGGTTGGAAGAAAGATGATAGTTCAAGCAATAGGCCATGGTCTCAGAGAGCCAAATGCAGTGCACTGGGTCCTACAATGGCACTTTTAAGATCACAGAATGGCTTTAAGAAATAG 1938 0.4298 MTTAMTEKVRLRLFFDDPNMLSKSKTNQGLNRCWFLLKPHLTTISDLTSHLQTLFRLHRTSPAGITLSMDGFVLPSFESTCILKDKDIVCVRRKGSSLTDGKPAMLPLEACENRSTEALELLAIEGIQEERREYETVNLDDDDDDVDNDQTEDVVYVEAKSDGNTTSKKRKASKKLKSPSQKKIKMSTTDNLSVIPEVNDEENGSLKDGAHRQPSPAKKSSKKLSKKSSNRDLIKQKDDQNGSTSDETRSLQPQGEGETKKLPSRSARRKKAKRKWLRELKLKEKEKENENENEKEKVLEKDDPQLPTKDKNCIVADVLQQSDEESEADDDMVPVEIKPGHIRFQSRGKDKAVPENQFPVDTFQWSGTTSKKKGQKWGKERTSSHKQDDYEQPRQDFPTVQNAGKKNTFDAVDFEKLTPYTDLPKEGNVIAYRLIELSESWTPEISSFRVGKVTQFDSKSNRIWLETVSEYPFDFRKKIDDLDDDATPAQYDPSPYQEDGSLEIDYVSLADVRIIKHGHSNLATVVASNDALVTPSKATNRSTDALVTPTKATNNSTVEKHVGNQTPVGSSKPQKEGHTPAKENGEVNVWDEINEALKAKKARLSQGDGWKKDDSSSNRPWSQRAKCSALGPTMALLRSQNGFKK 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03250 645 MobiDBLite consensus disorder prediction 373 393 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 279 308 - -
Vivi3g03250 645 Coils Coil 273 302 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 538 573 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 182 198 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 600 619 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 201 215 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 245 259 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 538 588 - -
Vivi3g03250 645 Pfam Coilin N-terminus 9 185 IPR031722 -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 332 350 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 264 278 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 226 244 - -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 600 645 - -
Vivi3g03250 645 PANTHER COILIN P80 5 642 IPR024822 -
Vivi3g03250 645 MobiDBLite consensus disorder prediction 156 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03250 Vivi-Chr3 55144927 55151167 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03250 K13150 - gmx:100776892 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03250 3 55144927 55151167 Vivi3g03250 3 55144927 55151167 ECH