Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03159 ATGAAAAAGAAACAATCTTTGCGAAACAAAGCCACCCATTTTGTATCTCTCCTTCTCAACCCCATCTCCGATCCTGATTCTCACCAACAACCCTCAAAACACCCTCCATCCTCTTCCTCTGAAGAAGTAGGTGAGGTTAAAATAAGTGATGAAGAGGGTAATACTAATAATCATGATTTAGTTGATGGACCTGATACTTCATCCTTCACTGCATTTCTCTATTCTTTTTTATCTTCCTCAAACTCTAAAGAGGATGCTAACTCAAATGGACAAAAGAGTGATGATAAAGGTAAGAATAGCCCTTTAACTGATTCATCCATGAAAGAAAATGGTGGGAAGAAAAGTTTGTTTACTAGAGGTAAGCAATCAGTTGGTATTGCTATTCGCCGAGCTGCCAGAATCGGTAGATTTCGCCATCATGGTCCAAAAGATAATAATGATAATAATCTTGAAGTGAAACATCAAGATAGGAGGAAAGAATCACTGCCTATGAAAGAATCGTTGCCTGTATCTTTGGATGATTTGCCACGAATTTCTGAACCTTCAGTTCTTGTTTCCGAAAGTATAAGGAATGTTCTCTATGCTTCTCTTCCACCACTTATGCATGGAAGGAAATGGTTGTTGCTATACAGCACTTGGAGGAATGGTATATCACTTTCAACTCTTTACCGAAGAAGTGCGTTATGGCCCGGATTGAGTTTGCTGGTTGTTGGAGATAAAAAAGGAGCAGTATTTGGAAGTTTGGTTGAAACACCTCTGAGATCATCCAACAAGAGGAAATATCAGGGAACAAACAGTACTTTTGTTTTCACAAATATCTCTGGTCATCCTATCATATATCGTCCAACAGGGGTAAACCGATATTTCACACTTTGCAATACTGACTACATAGCAATTGGCGGGGGAGGTCATTTTGCGCTTTATCTGGACAGTGATCTATTGAACGGCTCAAGTTCAATATCTGAAACTTTTGGAAATCCTTGCCTTGCGAATTCTCAGGACTTTGAAGTGAAGGAAGTGGAGTTATGGGGCTTTGTACAGACTTCAAGATATGAGGAAGTGCTTGCATTAAGCAGAACTGAGGCACCAGGGATCTGTCGGTGGTAA 1107 0.3993 MKKKQSLRNKATHFVSLLLNPISDPDSHQQPSKHPPSSSSEEVGEVKISDEEGNTNNHDLVDGPDTSSFTAFLYSFLSSSNSKEDANSNGQKSDDKGKNSPLTDSSMKENGGKKSLFTRGKQSVGIAIRRAARIGRFRHHGPKDNNDNNLEVKHQDRRKESLPMKESLPVSLDDLPRISEPSVLVSESIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSALWPGLSLLVVGDKKGAVFGSLVETPLRSSNKRKYQGTNSTFVFTNISGHPIIYRPTGVNRYFTLCNTDYIAIGGGGHFALYLDSDLLNGSSSISETFGNPCLANSQDFEVKEVELWGFVQTSRYEEVLALSRTEAPGICRW 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03159 368 MobiDBLite consensus disorder prediction 80 120 - -
Vivi3g03159 368 ProSiteProfiles TLDc domain profile. 183 346 IPR006571 -
Vivi3g03159 368 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 19 346 - -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 138 164 - -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 135 164 - -
Vivi3g03159 368 SMART 109ultra 182 346 IPR006571 -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 1 64 - -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 22 43 - -
Vivi3g03159 368 Pfam TLD 208 345 IPR006571 -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 44 58 - -
Vivi3g03159 368 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03159 Vivi-Chr3 53803567 53806370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03159 205 354 EF-hand Containing Proteins AT5G06260 29.375 2.92e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03159 - - gmx:100804124 489.189