Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03152 ATGGATCCATCCCATGTAGTTGCTTATGCAAACTTCAGTTGTGAAATAAAAATAATACAAGCTCGAAACGTTGAATTCATCAAGTCCACCAAAAACTTGTTTGCTAGGTTGTATGTTCCAACAGGAAACAACAAAAGAATTCAACTCAACAGCAAAAATGTTTGGGACAAGTCTTTTAATCTAGATTGTTCTTGCCCACAAGAATTCTTGGAAAACCTTAATCAACAAAGCCTAGTGTTGGAGCTAAGGCAGAGGAAGATGTGGGGGTCACAACTTATTGGTAAAGGTGAGATTCCATGGAAGGTGATTCTTGAATCACAAAAGATGGAGTTAAAAAAATGGTTGAAAATGGATTTGGTGAGTGGAAGTGATTGCAAAGAGGTTATGTTGACAACACCAGAAGTGGAAGTAGAGATTAAAGTAAAAGTGTGTTCAGTTGCTGAGATGGAGAAGCTAAGTAAGAAGAGGTTTAATAATTGGAATGAGTGTGGATGTAAAAATGGGCATGATCATAATGCTTGGTGCAATATTGCAGAAGACTGTGATATATTTGCACTTGGTGCAGCTTTGGAAGCTTTTTGA 582 0.3729 MDPSHVVAYANFSCEIKIIQARNVEFIKSTKNLFARLYVPTGNNKRIQLNSKNVWDKSFNLDCSCPQEFLENLNQQSLVLELRQRKMWGSQLIGKGEIPWKVILESQKMELKKWLKMDLVSGSDCKEVMLTTPEVEVEIKVKVCSVAEMEKLSKKRFNNWNECGCKNGHDHNAWCNIAEDCDIFALGAALEAF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03152 193 Gene3D C2 domain 7 145 IPR035892 -
Vivi3g03152 193 ProSiteProfiles C2 domain profile. 1 115 IPR000008 -
Vivi3g03152 193 PANTHER OSJNBA0006M15.15 PROTEIN 1 192 - -
Vivi3g03152 193 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 117 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03152 Vivi-Chr3 53711849 53712761 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03152 - - gmx:100807677 252.677