Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03143 ATGGCAAACCCAACTCATCTCTTCACTCTCCTCTTTCTCTTCTCATTTTTCTTCGCCGGAATCGTCATATCTGAAGAGGACTGTGTCTACACCGTCTACCTTAGAACTGGTTCGATCCTGAAGGCGGGAACAGACTCAAACATCATCCTCACCTTATACAATGCAAAAGGCTACGGCATAAAGATCAACAACCTCGAAGCATGGGGCGGGTTAATGGGACCGGGTTACAACTACTTCGAGCGTGGCAACCTTGATATATTCAGTGGTACAGCTCCTTGTTTGGACGGACCCGTTTGCAAGATGAACTTGACTTCAGACGGGTCGGGTGATCATCACGGTTGGTATGTTAATTATGTTGAGGTTACTACAACTGGTATCCACTCTCCATGTTCTCAAAAGCTCTTCACCGTGGAACAGTGGCTGGCTACCGATACGTCGCCGTATGAGCTTTCTTTTGTTAAGAATAACTGCCCGTATAAGGTGGGTCAGACCGAGGCGAAAGTAAAGACGGTTGATGTTGTTAGATCCGGGTCTGGGTCTGGATCTGGATCTGGTTTCTCGATCTTGGGCTCCACCGTGCGCGTGTAA 588 0.4813 MANPTHLFTLLFLFSFFFAGIVISEEDCVYTVYLRTGSILKAGTDSNIILTLYNAKGYGIKINNLEAWGGLMGPGYNYFERGNLDIFSGTAPCLDGPVCKMNLTSDGSGDHHGWYVNYVEVTTTGIHSPCSQKLFTVEQWLATDTSPYELSFVKNNCPYKVGQTEAKVKTVDVVRSGSGSGSGSGFSILGSTVRV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03143 195 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 29 146 IPR036392 GO:0005515
Vivi3g03143 195 ProSiteProfiles PLAT domain profile. 28 155 IPR001024 GO:0005515
Vivi3g03143 195 CDD PLAT_plant_stress 28 156 - -
Vivi3g03143 195 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 25 167 - -
Vivi3g03143 195 Pfam PLAT/LH2 domain 30 148 IPR001024 GO:0005515
Vivi3g03143 195 Gene3D PLAT/LH2 domain 21 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03143 Vivi-Chr3 53474367 53475470 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03143 - - gmx:100793024 245.743