Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03131 ATGGAGTCGCAACCTCCAAGATCCGAATCACAAACCGACCCTCTCCACAACCCATCCAACAAACACCCCTTAGACGAACTCTGCCACGACCTCAATTCCCTCCAAGACCTAGCCAACCGCGGCGCGTGGCGCACCATCATCGACAAAGTCTCACGTGCCAGAGCCCTCTCTCTTCTCCAAAAACCCCACGACCACCTCACCTACCTCGCTTTCAACGCCCTCGCTTTCACCAAACTACGTCGTTTCAATGAAGCTTCTTCCGAACTCGATTCCGTCGAAGATCTCGATAGTTCACATTACCAATACGAAACCTACCCGAAAATTTACCCTAACCGTGTCGGATCTATGGTTCCCTTTTCTCTCCGGTGGCTTCATGCTCTAATTCCGATCAAATTAGGGCAACGGCAACAAGGAATTGATCGGTTATACGGTCTCCTCGATTTCGTGCGAGAGAAGATTAACACCAAAGAAAACAACAATTTAATCGAATCCGTTCGGGTTTGGCGAAAAAGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAAGAGTTTGGTGTTTGTTTAAGCTTGATGAAAAGCTTACTCTCTCGTGATTCTACTGACCCTTATTTGATTTCGCAACTTGGGTATATTCAATTACAAACTGGTGACTTGGAAGGTGCAAAAGCTTCGTTTTTGAAAGCTGAAATTGATGGGAAGAACAATGGGTCATTGAGTGAGGTTGAGTTTATGAATCTTGTGAATAGAAACAAGGCTTTGGTGTATATGGTTGGGAAGGATTATGCATCTGCGGTGAGGGAATATGAAGAGTGTATTGTAAGGGATCATAGTGATATAGTTGCTTTTAACAATAAAGCTCTTTGTTTGATGTATTTGAGGGATTTGTCTGATTCAATCAAGGTGTTAGAGAATGCTCTTGAAAGGGTTCCTACGGTTGCGTTGAATGAGACACTGGTTGTTAATTTGTGTAGTATGTATGAGTTGGCTTATGTTAATCACTCGGATATTAAGAGAACGCTTAGTAGTTGGATTGCTCGTGTTGCTCCGGATGATTTTGATGCGACGTGTACGCGGACATGA 1095 0.4356 MESQPPRSESQTDPLHNPSNKHPLDELCHDLNSLQDLANRGAWRTIIDKVSRARALSLLQKPHDHLTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYQYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGIDRLYGLLDFVREKINTKENNNLIESVRVWRKREVFVVNCIIGHHLSHKEFGVCLSLMKSLLSRDSTDPYLISQLGYIQLQTGDLEGAKASFLKAEIDGKNNGSLSEVEFMNLVNRNKALVYMVGKDYASAVREYEECIVRDHSDIVAFNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTRT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03131 364 FunFam Trafficking protein particle complex subunit 12 175 346 - -
Vivi3g03131 364 SUPERFAMILY TPR-like 197 318 IPR011990 GO:0005515
Vivi3g03131 364 Gene3D Tetratricopeptide repeat domain 177 345 IPR011990 GO:0005515
Vivi3g03131 364 SMART tpr_5 207 239 IPR019734 GO:0005515
Vivi3g03131 364 SMART tpr_5 284 317 IPR019734 GO:0005515
Vivi3g03131 364 SMART tpr_5 250 283 IPR019734 GO:0005515
Vivi3g03131 364 MobiDBLite consensus disorder prediction 1 18 - -
Vivi3g03131 364 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 362 - -
Vivi3g03131 364 Pfam Tetratricopeptide repeat 212 233 IPR019734 GO:0005515
Vivi3g03131 364 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03131 K20309 - gmx:100779691 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03131 3 53142813 53144214 Vivi3g03131 3 53142813 53144214 ECH