Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03129 ATGCTGGGAGTGATCTTCTTTGGGTTCCTTGTGATTGCATACAGTGTGCTCCTTTGTCTGCCAGTTTCTATGCCAGTTTGGTGCTCCCTCACATATGGGGCATCTATTATGCAGGATAGAGATCTGAATGAGTATAGCCCCTCTAGTTCGTTATCCAGCAAGCATCTATCTTGCAGCCATCGGTTATGTGATATGGGTTCAAATTGTAAAACTTCCAAGCAGCAGTGTCCATATACTATCAATTACACGTCAGAGAATACATCAAGTTCTGGGTTGTTAGTTGAGGACATATTGCATCTTCAATCCGGCGATGGCGGTGGCAGCTCATCTAACTCTTCTGTTCAGGCTTCAGTTGTTGTCGGGTGTGGTATGAAGCAAAGTGGTGAGTATTTGAATGGCAATGCTCCGGATGGTGTCATTGGTTTGGGACCTGGGGAAAGTTCAGTTCCGAGTTTTCTTGCTAAATCAGGATTAATCCGTGATTCTTTTTCGTTGTGCTTTAATGAAGATGATTCCGGTAGATTATTTTTTGGTGATCAGGGATCAACCGTGCAACAGTCTACTCCATTCTTGCCCTTGGATGGAATATTTTCAACCTACATTGTTGGAGTGGAGGCCTTTTGTATTGGGAATTCGTGTCCTAAAGTAACAAGTTTTAATGCTCAGTTTGATAGTGGAACATCATTTACGTTTCTTCCGGGTCATGCATATGAAGCAATAGCTAAGGAGTTTGACAAACAAGTGAATGCTACAAGATCAACCTTTCAAGGAGCTCCTTGGGAATTTTGTTATGTACCCAGTTCGCAACAACAGCTGCCTAAGGTTCCCACATTGACACTCACATTCCAACAGAATAACAGTTTTGTGGTCTATAATCCTGTGTTTGTATTTTACAACGAACAGGGAATTGATGGATTTTGTTTAGCAATACAGCCAACCGATGGGGATATGGGAACAATTGGACAAAATTTCATGACGGGATACCGATTGGTATTTGATAGGGAAAACAAGAAGCTAGCATGGTCACGCTCAAATTGTCAGGATCTCAGTCTTGGCAAGAAGATGCCCCTCTCCCCTCCTAACAAGACATCGTCAAACCCGCTTCCTGCAGATGAGCAGCAAAGAATCAAAGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAAGGCTCCTCAAAATTCGTCAGTTGTTTCATCTCAGACATCTCAGATGATTTCATACTGGCATCATTGGCACTGCTATTGGCTGCTTCTATTTCATCTTCTGTTAGCCTTTTACTGA 1278 0.4296 MLGVIFFGFLVIAYSVLLCLPVSMPVWCSLTYGASIMQDRDLNEYSPSSSLSSKHLSCSHRLCDMGSNCKTSKQQCPYTINYTSENTSSSGLLVEDILHLQSGDGGGSSSNSSVQASVVVGCGMKQSGEYLNGNAPDGVIGLGPGESSVPSFLAKSGLIRDSFSLCFNEDDSGRLFFGDQGSTVQQSTPFLPLDGIFSTYIVGVEAFCIGNSCPKVTSFNAQFDSGTSFTFLPGHAYEAIAKEFDKQVNATRSTFQGAPWEFCYVPSSQQQLPKVPTLTLTFQQNNSFVVYNPVFVFYNEQGIDGFCLAIQPTDGDMGTIGQNFMTGYRLVFDRENKKLAWSRSNCQDLSLGKKMPLSPPNKTSSNPLPADEQQRIKGHAVAPAVAGKAPQNSSVVSSQTSQMISYWHHWHCYWLLLFHLLLAFY 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03129 425 Gene3D Acid Proteases 180 348 IPR021109 -
Vivi3g03129 425 Pfam Xylanase inhibitor N-terminal 42 179 IPR032861 -
Vivi3g03129 425 MobiDBLite consensus disorder prediction 350 373 - -
Vivi3g03129 425 PANTHER ASPARTYL PROTEASES 43 339 IPR001461 GO:0004190|GO:0006508
Vivi3g03129 425 SUPERFAMILY Acid proteases 40 347 IPR021109 -
Vivi3g03129 425 Gene3D Acid Proteases 23 179 IPR021109 -
Vivi3g03129 425 MobiDBLite consensus disorder prediction 350 371 - -
Vivi3g03129 425 FunFam Aspartyl protease family protein 1 182 348 - -
Vivi3g03129 425 Pfam Xylanase inhibitor C-terminal 220 342 IPR032799 -
Vivi3g03129 425 ProSiteProfiles Peptidase family A1 domain profile. 32 342 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03129 Vivi-Chr3 53126227 53129648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03129 44 349 Miscellaneous Gene Families AT1G44130 24.699 3.52e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03129 - - tpra:123903964 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03129 3 53126227 53129648 Vivi3g03129 3 53126227 53129648 ECH