Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03110 ATGGCTGCAGCAATGTTGTTGTGGCATGTCATTGCAGGCTTTCTATTTGTTTCCAATTTGGTATGTGTTTCAAGCCTTAATCATACTAAAACAAGAAATGAAGTAATCATTGCTCATCATGGAGCTGTTGCGACTGATGATCGACGATGCTCTAAGATTGGAATGGATGCTATTGTTGAAGGGGGACATGCAGTGGATGCTGCTGTGGCTGCTTCCCTTTGTTTGGGGGTTGTTGGTCCAGCTTCAAGTGGTATTGGTGGTGGTAGCTTTATGCTTATCAGTTTAGCTAGTGGAGTAGCTAAGGCTTTTGATATGAGAGAAACTGCTCCTCTTCTTGCTTCCAAGGATATGTATCATGGCAATACTACTCTGAAGGAAACAGGCGGCCTCGCAGTAGCAGTTCCAGGAGAACTTGCAGGCCTTCACAAGGCATGGAAACAACATGGAAAGCTTCCATGGGAGAGACTTGTAAAGCCAGCTGAGATTCTTGCTCTCAGAGGGTTTAAAATATCACCGTACCTTTACACACAGATGAAAAAATCAGAGTCAGGTATATTAAACGACAACGGTCTTAGTAGTGTTTTCGCACCACATGGAAAACTCTTGAAGGCGGGTGAAATATGCTACAATAAGAAACTAGCAGAAACTCTCCGAGCAATTTCAAAGTTTGGTCCACAAGTTTTGTATGGTGGAATAATCGGCATTAAGTTAGTGCAAGATGTTCGAAAAGCCGGAGGGATATTGACTGTAAAAGATCTCAAAAGTTACACGGTTAAAGAAAAGGAACCAATATCGATAGATTTTCTTGGATTAAAGATCCTTGGCATGCCTCCTCCTTCTGGTGGACCTCCTTTGATGCTGCTGCTGAACATTCTAGCACAATATGAACTTCCGTCGGGACTTTCTGGCGCATTAGGGATCCATAGAGAAATCGAGGCTTTGAAACATGTATTTGCGGTGAGAATGAATCTTGGTGATCCTGATTTTGTAAATGTAACTGAAGTTCTTTCTGATATGCTTTCGACTAAGTTCGCTCGAGTGTTGAGAAAAGACATCAATGATAATAGGACTTATAATTCAAGTCATTATGGTGGAAAGTGGAATCAGATAAATGATCATGGTACAAGTCATTTAAGCATAATAGACTTTGAGGGAAACGCTGTTTCCATGACTTCTACAGTAAATGAGTATTTTGGTGCAAAGATTCTTTCACCAAGTACAGGAATAGTGTTAAACAACGAAATGGATGATTTTTCCATGCCTATGAATGTTTCCAAAGATGTAGCACCGCCAGCTCCGGCCAATTTCATTGCGCCGGGGAAGCGACCATTATCATCTATGTCACCAATTATTGCCTTCAAGGATGGGAAAGTGAAAGCAGTAGTAGGTGCAAGTGGAGGAATTATGATTATTGCTGCAACTTCAGAAGTTCTTTTGAATCATTTTGTCAAAGGAATGGATCCGTTTTCTTCGGTAACGGCTCCAAGGGTCTATCACCAGCTGATACCTAACGTGGTTTATTATGAGAACTGGACAACTGTGAATGGCGACCACTTCGAACTTTCTGCTGATATCAGAGCATCCCTTAAAAGTAAGGGCCATGTCCTACAGGGCCTAGCTGGTGGAACAATATGCCAACTTATAGTTTCAGACATTTCTGAGCATTCAGGAAGAAACAAAGGTATTGGGAAGCTTGTGGCAGTAAGTGATCCTAGAAAGGGTGGATTTCCTGCAGGTTTTTGA 1743 0.4182 MAAAMLLWHVIAGFLFVSNLVCVSSLNHTKTRNEVIIAHHGAVATDDRRCSKIGMDAIVEGGHAVDAAVAASLCLGVVGPASSGIGGGSFMLISLASGVAKAFDMRETAPLLASKDMYHGNTTLKETGGLAVAVPGELAGLHKAWKQHGKLPWERLVKPAEILALRGFKISPYLYTQMKKSESGILNDNGLSSVFAPHGKLLKAGEICYNKKLAETLRAISKFGPQVLYGGIIGIKLVQDVRKAGGILTVKDLKSYTVKEKEPISIDFLGLKILGMPPPSGGPPLMLLLNILAQYELPSGLSGALGIHREIEALKHVFAVRMNLGDPDFVNVTEVLSDMLSTKFARVLRKDINDNRTYNSSHYGGKWNQINDHGTSHLSIIDFEGNAVSMTSTVNEYFGAKILSPSTGIVLNNEMDDFSMPMNVSKDVAPPAPANFIAPGKRPLSSMSPIIAFKDGKVKAVVGASGGIMIIAATSEVLLNHFVKGMDPFSSVTAPRVYHQLIPNVVYYENWTTVNGDHFELSADIRASLKSKGHVLQGLAGGTICQLIVSDISEHSGRNKGIGKLVAVSDPRKGGFPAGF 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03110 580 ProSitePatterns Gamma-glutamyltranspeptidase signature. 375 399 IPR000101 GO:0006751|GO:0036374
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 276 295 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 247 263 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 463 480 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 131 149 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 375 393 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 63 88 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 149 168 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 399 417 - -
Vivi3g03110 580 PRINTS Gamma-glutamyltranspeptidase signature 439 454 - -
Vivi3g03110 580 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 28 580 IPR000101 GO:0006751|GO:0036374
Vivi3g03110 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 32 580 IPR029055 -
Vivi3g03110 580 FunFam Gamma-glutamyltransferase 5 isoform 1 263 367 - -
Vivi3g03110 580 NCBIfam gamma-glutamyltransferase 43 535 IPR000101 GO:0006751|GO:0036374
Vivi3g03110 580 Gene3D - 370 580 IPR043137 -
Vivi3g03110 580 FunFam Glutathione hydrolase 1 370 580 - -
Vivi3g03110 580 Gene3D - 263 367 IPR043138 -
Vivi3g03110 580 Pfam Gamma-glutamyltranspeptidase 58 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03110 Vivi-Chr3 52664118 52667084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03110 30 580 Miscellaneous Gene Families AT4G39640 64.801 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03110 K18592 - gmx:100797040 877.47