Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03109 ATGAACGCCTACATTGTCGGTCTCATTGTTCCCCTCGTCATACTCATCTTCCGGACTTCCAACAACCGCAAACGCCGTGGCTCACCGGCAGATGTCGGAGGCGATCCCGGTTACGTAGTCCGCAACCACCGCTTCGCTTCCGTGATCAGTTCGGCTTGGGAAGATGTTACCACTCTCGCGGAGATGTTTGAGCATTCATGCAGGAAGCATCATGATAAGTTGTTACTTGGAACGCGTGATCTGATTTCTAGAGAAATGGAAGTTTCTTCCGATGGAAGGACTTTTGAGAAGCTCCATCATGGGGAGTATAGATGGGTTACGTATGGGAATGTTTTTGAATCTGTTGTTAATTTTGCGTCTGGTTTGGCGAATATTGGGCATGTTAGGGAAGAACGTGCGGCGATTTATGCTGAGACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGCTTCAGGAGAAATGTGACGGTTGTGACAATGTATGCTTCGTTGGGAGAGGAGGCTTTGTGCCACTCATTGAATGAGACAGAGGCTACAACTGTGTTTTGTGGGCGCAAGGAATTGAAATCACTTCTACATATTTCCGGACAGCTTGACTTTGTGAAACGTGTGATATGTATTGACAATGATGTCCCATCTGATGCCTCATCTGCTCAGCATGGATGGACAATCACTTCCTTTGCTGATGTTGAGAGGTTTGGTAGAGAAAAGCCTATTGCAGCTGATTTACCCCTTTCAGCTGATGTTGCAGTTATAATGTACACTAGTGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACACATGGAAATATCGTAGCAACGGTGTCTGCGGTAATGACAATTATTCCTAACCTTGGGAAAAATGATGTATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAATAGCTGAGAATTTACTTGCAGCTGTTGGAGGCTCTATAGGATACGGAACTCCTTTGACTCTAACCGATACATCGAACAAGGTAAAGAAGGGGACAAAGGGGGATGCCACTGCATTAATGCCAACTGTGATGGCATCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTTTTCAAGAAGGTAAATACAAAAGGAGGATTCTCAAAGAAGTTGTTTGAGTTAGCCTATGCACGAAGGTTGCGGGCGATTAATGGTAGCTGGTTTGGCGCTTGGGGCTTGGAAAAAGCTCTATGGAATTTTTTTGTGTTCAAAAAAGTCCAAGCAATTCTGGGTGGTCGTATTCGTTTTATACTATGTGGTGGTGCACCCCTTTCTGCTGACACACAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAAGTCAAGGATATGGTCTCACAGAGACTTGTGCTGGTGGAACATTCTCTGATTTTGACGATACATCTGCTGGCCGTGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAGTTGACTGGCCTGAAGGTGGATATTCAACTACTGATTTACCGATGCCTCGTGGTGAAATAGTAATTGGTGGTTCAAATATCACTCTTGGATATTTCAAAAATGATGAAAAGACAAGGGAATCTTACAAGGTTGACGAACGAGGAATAAGGTGGTTCTACACCGGTGACGTAGGAAGATTTCACTCAGACGGGGTCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAATTGCAGCATGGAGAATATGTGTCCTTGGGAAAGGTTGAGGCAGCTCTTCTTGGCAGCCCCTTTGTGGACAACATTATGTTGTATGCTGATTCTTTTCAAACTTACTGTGTGGCACTTGTGGCTGTTTCTCATTCTGCATTGAGTGAATGGGCTTCAAAGCAAGGAATTGCTTCGTCAGATTTTTCAGAACTATGCCAGAAAGAAGAAGCAGTGAAGGAAGTGCATGCATCACTTCTAAAGGAAGCAAAGAAGGCTCGTCTGGAAAAATTCGAGATTCCTGCAAAAGTTAAATTGCTTTCTGATCCATGGACTCCTGAGACTGGCCTAGTCACTGGAGCCCTTAAGATCAAGAGAGATATCATTAGAAAGACTTTTCAGGAAGACCTCTCCAAGTTATATGGCAAATAG 2085 0.4374 MNAYIVGLIVPLVILIFRTSNNRKRRGSPADVGGDPGYVVRNHRFASVISSAWEDVTTLAEMFEHSCRKHHDKLLLGTRDLISREMEVSSDGRTFEKLHHGEYRWVTYGNVFESVVNFASGLANIGHVREERAAIYAETREEWFIALQACFRRNVTVVTMYASLGEEALCHSLNETEATTVFCGRKELKSLLHISGQLDFVKRVICIDNDVPSDASSAQHGWTITSFADVERFGREKPIAADLPLSADVAVIMYTSGSTGLPKGVMMTHGNIVATVSAVMTIIPNLGKNDVYLAYLPMAHILELIAENLLAAVGGSIGYGTPLTLTDTSNKVKKGTKGDATALMPTVMASVPAILDRVRDGVFKKVNTKGGFSKKLFELAYARRLRAINGSWFGAWGLEKALWNFFVFKKVQAILGGRIRFILCGGAPLSADTQRFINICLGAPISQGYGLTETCAGGTFSDFDDTSAGRVGPPLPCSYIKLVDWPEGGYSTTDLPMPRGEIVIGGSNITLGYFKNDEKTRESYKVDERGIRWFYTGDVGRFHSDGVLEIIDRKKDIVKLQHGEYVSLGKVEAALLGSPFVDNIMLYADSFQTYCVALVAVSHSALSEWASKQGIASSDFSELCQKEEAVKEVHASLLKEAKKARLEKFEIPAKVKLLSDPWTPETGLVTGALKIKRDIIRKTFQEDLSKLYGK 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03109 694 Gene3D - 44 553 IPR042099 -
Vivi3g03109 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Vivi3g03109 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Vivi3g03109 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 40 692 - -
Vivi3g03109 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03109 Vivi-Chr3 52646082 52650885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03109 24 692 Acyl Lipid Metabolism Gene Families AT2G04350 61.756 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03109 K01897 - gmx:100778889 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03109 3 52646082 52650885 Vivi3g03109 3 52646082 52650885 ECH