Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03106 ATGGCTCAAACTATGTTGCTCATGTCTAGTGTCTCTAGCACCTATTCTGTTACCTTGAACAAAGATCCTTTGCTTCAATTACAGTGTCAAAGATTGAAGCCTAGGTTCTCTGATATCTCATTCAACCCACTCTCTTCTAATTCTAAGTCTTTTTCATCTCGCACATTTAAAACTCTGGCTCTATTCAAATCAAAGACCAAAGCCCCTGCTAAGGTTGTGCCTAAACCAAAACCAAAGGTTGAAGATGGTGTGTTTGGAACTTCTGGAGGATTTGGTTTCACTAAACAGAATGAACTCTTTGTTGGTCGTGTTGCTATGATCGGTTTTGCTGCATCAATTTTGGGTGAAGCAGTAACCGGGAAAGGAATTCTATCACAATTGAATTTGGAAACTGGAATTCCAATTTATGAAGCTGAGCCACTTCTCCTATTTTTCATCATTTTCACACTTCTAGGAGCCATTGGAGCTCTAGGTGACCGTGGTAAATTCGTTGATGATGAACCTACTACCGGAGGCGTTATCCCTCCAGGAAAAGGCTTCAGAGCAGCTCTCGGTCTCAGCGAAGGAGGTCCTTTGTTTGGATTCACCAAATCCAATGAACTGTTTGTTGGAAGATTGGCTCAATTGGGATTTGCTTTCTCTTTGATTGGAGAGATTATCACCGGAAAGGGAGCACTAGCTCAACTCAACATTGAAACTGGTGTACCGATCAATGAAATCGAACCACTTGTGTTGTTCAATGTTGCTTTCTTCTTCATTGCTGCTTTGAATCCTGGAACTGGCCAGTTTGTAACAGATGATGAAGAAGATTAG 813 0.4145 MAQTMLLMSSVSSTYSVTLNKDPLLQLQCQRLKPRFSDISFNPLSSNSKSFSSRTFKTLALFKSKTKAPAKVVPKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMIGFAASILGEAVTGKGILSQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPTTGGVIPPGKGFRAALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGQFVTDDEED 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03106 270 FunFam Photosystem II 22 kDa protein, chloroplastic 138 240 - -
Vivi3g03106 270 FunFam Photosystem II 22 kDa protein, chloroplastic 58 137 - -
Vivi3g03106 270 Gene3D Chlorophyll a/b binding protein domain 52 135 - -
Vivi3g03106 270 SUPERFAMILY Chlorophyll a-b binding protein 79 249 - -
Vivi3g03106 270 Gene3D Chlorophyll a/b binding protein domain 136 241 - -
Vivi3g03106 270 Pfam Chlorophyll A-B binding protein 89 215 IPR022796 -
Vivi3g03106 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 71 131 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03106 K03542 - gmx:100807355 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03106 3 52594709 52596747 Vivi3g03106 3 52594709 52596747 ECH