Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03098 ATGGTGCTTGCCAAAAAATCCATTCGTTGTCTTTCCAAATCATGCAAATCGTTCATCAACATATGGTTACGCCGTAAAACATCATCATCCCCAATCGATGGTAAACCAACACGCCTCAAACAAACTCAGCAGGAATCTGTTGTAGATGACAAATCGGGTAACCATACGAATGGAATTCGCGAAATGGGATTGAATGCAGATGCATTAAGAGAGAAGGATATAATGATGAGTTCGAGATTAGGATGTTGTTTATGTAGGCATAGAAGCTTAGGAAATTCGCGTATACCTTCCAATTCGATGGCTTCTACATCAAGAAACAACTCGATTAACAGGAAGAGGCGTAATCTTACGCGAAGCAAGAGCGTCGAGAGCTTTGATGATTTTGTACCTGCCCCCTTTTCATTAGATACCAACGGCAGCTTCCAAATGCCTAATCGTATGCCGTCAAGAAGTGGTAGTCTCCGTAAAGGTGGAGCTCCGATTATGTATTCCAATTCATCAGGAATGCTAAAACAACCACCAATTGAGAAGAATCTCGAATGCACCCTGGAAGAGCTGTGTTATGGTTGCACGAAAAAGATCATGATCACGAGAGACGTCTTCGCAGATACCGGAGGTGTGGTTCAAGAGGAGGAACTATTAACAATAAATGTAGAACCTGGATGGAAGAAAGGAACAAAGATAACATTTGAAGGCAAAGGGAATATAAGGCCTAATGCATACCAAGAAGACATAGTATTTTATATATCTGAGAAAGGACACCAGTTTTTTAGAAGAGAAGGTGATGATTTGGAATTATGCTTAGAAATTCCCTTAATAAAGGCACTTACCGGGTGTACGTTATCGGTTCCATTGTTGGGTGGAGAGCATATGAATTTGACTGTAGATGATGTTATATACCCTGGCTATCAGAAGATTGTCAGTGATCAAGGTATGTCAATCTCCGGAGAATCAGGGAAGAGAGGAGACTTAAGAATTAGATTTCTTGTTGAGTTTCCAACACATCTTACAGATAATCAAAGATCTGATGTTTTTGGTATTTTACAGCATTCTTGTTAA 1059 0.4004 MVLAKKSIRCLSKSCKSFINIWLRRKTSSSPIDGKPTRLKQTQQESVVDDKSGNHTNGIREMGLNADALREKDIMMSSRLGCCLCRHRSLGNSRIPSNSMASTSRNNSINRKRRNLTRSKSVESFDDFVPAPFSLDTNGSFQMPNRMPSRSGSLRKGGAPIMYSNSSGMLKQPPIEKNLECTLEELCYGCTKKIMITRDVFADTGGVVQEEELLTINVEPGWKKGTKITFEGKGNIRPNAYQEDIVFYISEKGHQFFRREGDDLELCLEIPLIKALTGCTLSVPLLGGEHMNLTVDDVIYPGYQKIVSDQGMSISGESGKRGDLRIRFLVEFPTHLTDNQRSDVFGILQHSC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03098 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 174 254 IPR008971 GO:0006457|GO:0051082
Vivi3g03098 352 MobiDBLite consensus disorder prediction 30 64 - -
Vivi3g03098 352 Pfam DnaJ C terminal domain 175 333 IPR002939 -
Vivi3g03098 352 Gene3D - 253 350 - -
Vivi3g03098 352 MobiDBLite consensus disorder prediction 94 110 - -
Vivi3g03098 352 Gene3D - 174 252 - -
Vivi3g03098 352 MobiDBLite consensus disorder prediction 30 53 - -
Vivi3g03098 352 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 125 348 - -
Vivi3g03098 352 MobiDBLite consensus disorder prediction 94 117 - -
Vivi3g03098 352 FunFam DnaJ subfamily B member 13 254 334 - -
Vivi3g03098 352 CDD DnaJ_C 173 336 - -
Vivi3g03098 352 FunFam Dnaj homolog subfamily b member 171 252 - -
Vivi3g03098 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 342 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03098 Vivi-Chr3 52495944 52497408 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03098 K09519 - gmx:100782604 386.341