Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03091 ATGGGCTGCGGGGGCTCCAAGGTGGAGGAGTTCCCCGTGGTAACTCTTTGCCGAGAAAGAAAACAGTTTCTCAAAAACGCCTCCGACCAACGCTACGCTCTGGCCATCGCGCACGTCGCTTATATGCAATCTCTGAAAGATATAGGTGAAGCTCTTCGGAAATTCTCCGATCGGGATCTCTTTCTTCCAACAAACTCGGCTTCTTCTTCGTCTTCACTTTCTTCCCCTGTTCTCACATTGCCTTCACGGGAAGGTAAATCGAAAGATGGTAATGATAGTAGCCGCCACATTTCGTCTTCTTCACCTTCTCACGATGGTGATGATTCTCACTTGCATCTTTCTTCTGGATCGGAGGTGAGTTCTCCTTCTCCGGATCACATTCATCATCATGATCATCGAACACCCGAGCCTCAATACGAACCAGAGTTCGAACCAGGACCAGAACATGTACCAGAACCAGAGCAACCTTCATCTTCGAACGGGTTCAATTATCCATTTCCGTATCCGTATCCATATCCGTATCAACAAGATTGGACTCAAACGCAACCAGGGGTTAATAATTATGCATATTATATGAAGAAATCTGCACCTCGTGGAAATTCCATGATCTATCAAGAACCAGAGAATCGTGTAGCAGCATCTGGACAATGGAATGGTTCTCCTTACGGTTATGGTTATTCTGGTATGAATGGGAGTGCTGGTGGTTATTATGGTTTTCCGGCGGGGCCTTCGTCTTCTTCTCCGACTCCACCTCCTCCGCCTCCTGCTCCACCTTCGCCGCCACGAGTCTCCACTTGGGATTTTCTGAATTTTTTTGAGGCTGTTGATAATGGTTATTCGGGGTATGGAAATTATAGATCAGAGTTAGGGTTAGCGTCGAGTGCGAGTAGTCCTGATTCGAAAGAGGTGAGGGAGAGAGAAGGGATTCCTGAACTAGAAGATGAAACTGAACAGGAAACGGTGAAGGAGGTGAAGAAGGTGAAGGAGGCTAGTTACGAGAAGAAGAAAAAAGTGGCAGAGGAAGAGGAAAAGGTAGAGGTTGATAGAGGGAGAGATTTTGGTGAAGGTACTTCGAACTCGAAGGAAGTGCCATTGCAACAGGTGAGTAGTAGTGAGGGAAGTTCCAAAACGGTGAGGTTTCATACCAGTGAAAGTAGTGGTGATTCTATTTCTTCTCATGAAAAAAAGAGTCCTGATAGTGTTGTTTCTAAAGGATCTCCTAGAAAGAAAGGTGTGAGTTTTGAGATTGATGGTGATGAAGATGCAACTGTTACCGCGGTGGATATTGAGGGCGAGGGTTCTATTTTGAGTAGCTTAACCACTTTGTCTCCACATGGAAATAGGGATCTTAAGGAGGTTGTTAGAGAAATTAGAGATGAGTTTGAGACTGCTTCTAATCATGGAAAAGAGGTTGCGTTTCTTCTTGAGGCTTGCAAACCACCTTATCAGTCAAGGGCTGCTGCATTTAGAGTTATCTTATCAAGGATCTTGCAGATGCTAGCACCTTCCGGGCCACCTTCGAATCCTCCATCTGGGCCACCGATACATTTTTCTTCTAGGACAATGAAATTGGCAAAAGCATACTGTGGAGAACCTGAGCAAGAGTTAATATCAAATCCGATCAACCTTTCATCTACATTGGAGAAACTTTATGCCTGGGAAAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCCATTTACGAGAAACAGTGCAAGAGACTGAAAGCATTGGATGAACGAGGAGCTGAATCTACTAAAATAGATGCTACCGAGACATCAATAAGAAAGTTGCTAACAAAAATAAACATTTGCATCAGAAGTGTTGAAAAAATATCAGCCAGGATACATAAATTGAGGGACGAGGAATTGGAGCCTCAGCTTGCTGCATTAATTACCGGATTGATAAGAATGTGGAAATTCATGTTCCAATGCCACCAGAAGCAGTTCCAGGCTATCATGGAGAGTAAAACTCAATCTCTCAAGTTAAACGCCGGTTTGCAAAGAGATGAAGGCTTGAAAGCCATTATGGAACTCGAAAGGGAGCTTTTGAAGTGGTGCACTCAGTTCAACAATTGGGTGGGAACCCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCATAAGGTGCCTTCTTGATGAACCTGAAGAAACAGCTGATGGTGTTGTCCCTTTCTCACCAAGTAGGATAGGAGCTCCACCAGCTTTCATAATCTGCAACGATTGGCAGCAAGCAATGAATAGAATTTCAGAAAAAGAGGTGGCGGAAGCTATGGGCGAATTTGCTCAAAAACTGCACGAGCTATGGGAGAGACAAGATGAGGAACAAAAAAGGAAAATCAGGGCGGAGTATCTATCGGAGGACTTTGAAAAACAACTTAAAGCTTTGCGCACCGAAATGGGAAGCTCAAAACCGAAGCATTGCGAAATTTCAGGAAAGACTAAATTGTCGAAGTTCACTTCCGATAGTGGTGTTTCACCACTTGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAGATTGCATGAAGAGAGGGCCAGACATAAAGAAGCCATTAAGCTTGTCCGCGATGCAGCTTCGAGTAGTTTACAAACTGGTTTGATTCCCATTTTTAAGACATTAGAAAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAGCAAGTCAGACTTCAAAATACCGTGGCCTCGTAG 2706 0.4375 MGCGGSKVEEFPVVTLCRERKQFLKNASDQRYALAIAHVAYMQSLKDIGEALRKFSDRDLFLPTNSASSSSSLSSPVLTLPSREGKSKDGNDSSRHISSSSPSHDGDDSHLHLSSGSEVSSPSPDHIHHHDHRTPEPQYEPEFEPGPEHVPEPEQPSSSNGFNYPFPYPYPYPYQQDWTQTQPGVNNYAYYMKKSAPRGNSMIYQEPENRVAASGQWNGSPYGYGYSGMNGSAGGYYGFPAGPSSSSPTPPPPPPAPPSPPRVSTWDFLNFFEAVDNGYSGYGNYRSELGLASSASSPDSKEVREREGIPELEDETEQETVKEVKKVKEASYEKKKKVAEEEEKVEVDRGRDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHTSESSGDSISSHEKKSPDSVVSKGSPRKKGVSFEIDGDEDATVTAVDIEGEGSILSSLTTLSPHGNRDLKEVVREIRDEFETASNHGKEVAFLLEACKPPYQSRAAAFRVILSRILQMLAPSGPPSNPPSGPPIHFSSRTMKLAKAYCGEPEQELISNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDERGAESTKIDATETSIRKLLTKINICIRSVEKISARIHKLRDEELEPQLAALITGLIRMWKFMFQCHQKQFQAIMESKTQSLKLNAGLQRDEGLKAIMELERELLKWCTQFNNWVGTQKSYVENLNGWLIRCLLDEPEETADGVVPFSPSRIGAPPAFIICNDWQQAMNRISEKEVAEAMGEFAQKLHELWERQDEEQKRKIRAEYLSEDFEKQLKALRTEMGSSKPKHCEISGKTKLSKFTSDSGVSPLDDLKVDLDSMKKRLHEERARHKEAIKLVRDAASSSLQTGLIPIFKTLESFTSEVVKAHEQVRLQNTVAS 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03091 901 MobiDBLite consensus disorder prediction 318 356 - -
Vivi3g03091 901 Coils Coil 832 859 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 244 262 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 283 416 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 63 166 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 359 387 - -
Vivi3g03091 901 PANTHER UNCHARACTERIZED 1 895 - -
Vivi3g03091 901 Coils Coil 561 581 - -
Vivi3g03091 901 Pfam Protein of unknown function (DUF632) 450 770 IPR006867 -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 235 263 - -
Vivi3g03091 901 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 63 81 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 123 149 - -
Vivi3g03091 901 MobiDBLite consensus disorder prediction 388 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03091 Vivi-Chr3 52382301 52386655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03091 253 786 Acyl Lipid Metabolism Gene Families AT2G27090 27.549 9.55e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03091 - - aprc:113852495 1017.3