Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03090 ATGGCTAAAAGCGTTGCGATTTTCGGTTTTTTGTTCTATCTTCTTGTGTTGCTTCCTTCTCAGATCTCAGCTGAGGAATCAGAGGCCAAGGAATTCGTTCTCACATTGGATAACACCAATTTCCATGACACTGTCAGCAAGCACGATTTCATCGTCGTCGAGTTTTACGCTCCATGGTGTGGTCACTGCAAGCAGCTTGCTCCAGAGTATGAAAAAGCTGCTTCTATCTTGAGCGGTCTTGAAACTCCAATTGTTTTGGCTAAAGTTGATGCCAATGAGGAGAAGAACAAGGACCTTGCATCTGAATTTGAAGTGAAGGGATTCCCAACCATTAAGATTTTGAGGAATGGTGGAAAGAATAGTCAGGAATACAAAGGTCCCCGTGAAGCTGATGGTATCGTTGAATACTTGAAGAAACAAAGTGGGCCTGCATCAACAGAAATTAAATCTGCTGATGAAGCCAGTGCTTTTATTGGTGAAAACAAAATTGCTATCGTTGGAGTTTTCCCTAAATTCTCTGGAGAGGAGTATGATAACTTCCTTGCATTAGCAGATAAGTTGCGTGCTGATTATGACATTGCCCACACCTTGGATGCCAAACACCTCCCAAGAGGAGACTCATCCGTGTCCGGCCCTGTAGTTAGATTATTTAAGCCATTTGATGAGCTCTTTGTTGACTCCAAGGATTTCAATGTTGAAGCTCTAGAGAAATTTGTTGAAGAATCCAGTATCCCCCTTGTGACTATCTTCAACAATGAACCAAGCAATCACCCTTTTGTTGTCAAATTCTTTAACTCTCCCAATGCAAAGGCAATGTTGTTCACCAACTTCACTTCCGAAAGTACTGAAGCTTTCAAATCAAAATACCGTGAAATTGCTGAGAAATACAAACAACAGGGAATAAGCTTTCTTATTGGAGATGTTGAGTCCAGCCAAGGTGCCTTCCAGTATTTTGGACTTAAGGAAGACCAAGTACCTCTAATTATTATTCAGGAAACTAATGGCAAGAAATTTTTCAAGCCCAACTTGGAACCAGATCACCTTTCAGCTTTTGTGAATGAATACAAGGATGGAAAAGTTGCTCCATTTGTCAAGTCTGAACCTATCCCTGCAACTAACAACGAACCTGTTAAAGTGGTAGTTGGGGAAACTCTTCAGGAAATAGTTTTCAACTCAGGGAAGAACGTTTTGCTTGAGTTTTATGCCCCATGGTGTGGTCACTGCAAATCCTTGGCTCCAATCTTGGATGAAGTTGCTGTCTCATTCCAAAGTGATGCTGATGTTGTTATTGCAAAACTTGACGCAACTGCCAATGATATCCCAAGCGAAACCTTTGAGGTCCAAGGTTATCCAACTTTGTACTTCAGGTCCGCAAGTGGAAAGATATCACAATATGACGGTGGTAGGACCAAGGAAGACATCATAGAATTCATTCAAAAGAACAAGGACACAACTGGTGCTGCTCAACAAGAAGTAGAACAGCCAAAAGCTCCTGCTCAGCAAGAAGTAGAACAACCTAAAGATGAGCTTTGA 1533 0.4162 MAKSVAIFGFLFYLLVLLPSQISAEESEAKEFVLTLDNTNFHDTVSKHDFIVVEFYAPWCGHCKQLAPEYEKAASILSGLETPIVLAKVDANEEKNKDLASEFEVKGFPTIKILRNGGKNSQEYKGPREADGIVEYLKKQSGPASTEIKSADEASAFIGENKIAIVGVFPKFSGEEYDNFLALADKLRADYDIAHTLDAKHLPRGDSSVSGPVVRLFKPFDELFVDSKDFNVEALEKFVEESSIPLVTIFNNEPSNHPFVVKFFNSPNAKAMLFTNFTSESTEAFKSKYREIAEKYKQQGISFLIGDVESSQGAFQYFGLKEDQVPLIIIQETNGKKFFKPNLEPDHLSAFVNEYKDGKVAPFVKSEPIPATNNEPVKVVVGETLQEIVFNSGKNVLLEFYAPWCGHCKSLAPILDEVAVSFQSDADVVIAKLDATANDIPSETFEVQGYPTLYFRSASGKISQYDGGRTKEDIIEFIQKNKDTTGAAQQEVEQPKAPAQQEVEQPKDEL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03090 510 NCBIfam protein disulfide-isomerase 33 510 IPR005792 GO:0003756
Vivi3g03090 510 CDD PDI_a_family 34 137 - -
Vivi3g03090 510 MobiDBLite consensus disorder prediction 485 510 - -
Vivi3g03090 510 SUPERFAMILY Thioredoxin-like 33 143 IPR036249 -
Vivi3g03090 510 ProSitePatterns Thioredoxin family active site. 397 415 IPR017937 -
Vivi3g03090 510 Gene3D Glutaredoxin 142 246 - -
Vivi3g03090 510 Gene3D Glutaredoxin 20 141 - -
Vivi3g03090 510 Pfam Thioredoxin-like domain 169 354 - -
Vivi3g03090 510 SUPERFAMILY Thioredoxin-like 242 374 IPR036249 -
Vivi3g03090 510 FunFam Protein disulfide-isomerase 372 485 - -
Vivi3g03090 510 Pfam Thioredoxin 377 480 IPR013766 -
Vivi3g03090 510 Pfam Thioredoxin 33 139 IPR013766 -
Vivi3g03090 510 CDD PDI_a_PDI_a'_C 376 478 - -
Vivi3g03090 510 ProSiteProfiles Thioredoxin domain profile. 23 142 IPR013766 -
Vivi3g03090 510 CDD PDI_b_family 145 241 - -
Vivi3g03090 510 Gene3D Glutaredoxin 365 500 - -
Vivi3g03090 510 PRINTS Thioredoxin family signature 51 59 - -
Vivi3g03090 510 PRINTS Thioredoxin family signature 59 68 - -
Vivi3g03090 510 PRINTS Thioredoxin family signature 104 115 - -
Vivi3g03090 510 FunFam Protein disulfide-isomerase 141 241 - -
Vivi3g03090 510 NCBIfam protein disulfide-isomerase domain 381 481 IPR005788 GO:0003756
Vivi3g03090 510 NCBIfam protein disulfide-isomerase domain 37 140 IPR005788 GO:0003756
Vivi3g03090 510 CDD PDI_b'_family 260 356 - -
Vivi3g03090 510 FunFam Protein disulfide-isomerase 22 140 - -
Vivi3g03090 510 PANTHER PROTEIN DISULFIDE ISOMERASE 14 507 - -
Vivi3g03090 510 FunFam Protein disulfide-isomerase 242 371 - -
Vivi3g03090 510 Gene3D Glutaredoxin 247 364 - -
Vivi3g03090 510 SUPERFAMILY Thioredoxin-like 344 484 IPR036249 -
Vivi3g03090 510 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Vivi3g03090 510 SUPERFAMILY Thioredoxin-like 148 253 IPR036249 -
Vivi3g03090 510 ProSiteProfiles Thioredoxin domain profile. 355 483 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03090 Vivi-Chr3 52357015 52360577 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03090 K09580 - gmx:100170705 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03090 3 52357015 52360577 Vivi3g03090 3 52357015 52360577 ECH