Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03088 ATGGCTTCTTCAACCATTCCAAACACACCCTTAACCTTGAGTTCCCACACCTACGTCGATCTCAAATCACCATCCACATTACCCAACTATCTAAGCTTCTCTTCATCAAAGCGCCGACAACCTCCAAGTCTTTTCACTGTTAGAGCTAGTGACTCCGATTTCGAAGCCGCGGTTGTTGCCGGTAAAGTACCGGAAGCACCTCCTGTACCGCCTACACCGGCCGCACCAGCTGGAACCCCAGTGGTTCCTTCACTTCCTATTCAAAGACGTCCCCGACGGAATAGAAGATCGCCTGTACTTAGATCGGCGTTTCAGGAAACTAGTATATCACCTTCCAATTTTGTCTATCCACTTTTTATACATGAAGGCGAGGAGGATACCCCTATTGGGGCTATGCCTGGATGTTACAGGCTTGGTTGGAGACATGGACTTGTGGAAGAGGTTGCAAAAGCACGGGATGTTGGTGTTAACAGTGTTGTGCTCTTCCCCAAAATTCCAGATGCTTTGAAGACCCCCACAGGAGATGAAGCATACAATGAGGATGGTTTAGTGCCTCGGACTATACGGTTGCTCAAGGATAAGTACCCTGATCTTATTATTTACACAGATGTTGCATTAGATCCTTATTCGTCAGATGGACATGATGGCATAGTCAGAGAAGACGGAGTTATTATGAATGATGAAACTGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGCACGGGCTGGAGCAGATGTTGTCAGCCCCAGCGATATGATGGACGGTCGGGTAGGAGCGATGCGAGTAGCTCTCGATGCTGAAGGTTTTCAGCATGTTTCTATTATGTCATATACTGCAAAGTATGCAAGCTCATTTTATGGGCCATTTAGAGAAGCTCTGGACTCCAACCCCCGGTTTGGGGATAAGAAGACTTACCAGATGAACCCAGCCAATTATAGAGAGGCTCTGACGGAGATGAGGGAAGACGAGTCTGAAGGAGCCGATATTCTCTTGGTGAAGCCCGGTCTTCCCTATTTGGATATCATAAGACTACTTAGAGATAACTCTCCACTGCCAATTGCAGCATACCAGGTTTCTGGTGAATATTCAATGATAAAAGCTGGTGGTGCTCTTAAAATGATTGACGAAGAAAAGGTTATGATGGAGTCATTATTGTGCCTCCGACGGGCTGGTGCTGACATCATCCTAACATATTTTGCTCTTCAAGCTGCCCGGACTTTATGTGGAGAGAAGAGGTGA 1242 0.4662 MASSTIPNTPLTLSSHTYVDLKSPSTLPNYLSFSSSKRRQPPSLFTVRASDSDFEAAVVAGKVPEAPPVPPTPAAPAGTPVVPSLPIQRRPRRNRRSPVLRSAFQETSISPSNFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYNEDGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAMRVALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARTLCGEKR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03088 413 Pfam Delta-aminolevulinic acid dehydratase 89 406 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 68 410 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 CDD ALAD_PBGS_aspartate_rich 97 409 - -
Vivi3g03088 413 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 327 339 IPR030656 -
Vivi3g03088 413 MobiDBLite consensus disorder prediction 65 80 - -
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 352 367 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 275 294 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 382 401 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 327 343 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 237 256 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 PRINTS Delta-aminolevulinic acid dehydratase signature 206 220 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 SUPERFAMILY Aldolase 84 409 - -
Vivi3g03088 413 MobiDBLite consensus disorder prediction 65 100 - -
Vivi3g03088 413 SMART ALAD_2 86 408 IPR001731 GO:0004655|GO:0033014|GO:0046872
Vivi3g03088 413 Gene3D Aldolase class I 79 413 IPR013785 -
Vivi3g03088 413 FunFam Delta-aminolevulinic acid dehydratase 78 413 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03088 K01698 - gmx:548095 677.937