Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03082 ATGAATTCATTGAACTTGCAGGTGAGAATAATGATGAAGAGAAAAAGATCCCCCAAACCGCTACCACCACCACCTTCAACCCCTCCAACACCCCAAACCCAATCCCGCCACTCCACCAACCTCTCCAAATCCCGCCTATGGATCCCTCTCAACCTAACCCGACAAGACCTCTCACTACCCCTCACCTTCCCCACCGGCCAAACCTTCCGATGGAAAAACACCGCTCCTTTCCAATACACCGGCGTTATCGGATCCCACCTCGTATCTCTCAAACACCTCCAAAACGGCGACGTTTGCTACTCCCTTCACTCCCAATCAAACCATGATGCCAAAACGGCACTGCTCGATTTCTTAAACGCAGACGTTTCTCTCGCTGACACGTGGGAGGTTTTCTCGGCTAATGATGAGAGATTCGCGGGATTAGCGCAACATTTGGGTGGTGCTAGGGTTTTGAGACAAGATCCCTTTGAATGCTTGATTCAGTTCATGTGTTCTTCCAATAATCATATTAGTAGAATCACGAAAATGGTTGATTATGTTTCGTCTCTTGGGGATTATTTAGGTCACGTTGAAGGGTTTGATTTTCATGCCTTTCCTACTCTTCACCAGCTTTCGTTGGTTTCTGAACAACAACTCAGAGACGCTGGTTTTGGTTACAGGGCTAAGTATATAGTTGGAGCTGTAAGTGCTTTGCAATCAAAACCTGGAGGTGGAGAAGAATGGCTTCATTCTCTTCGGAAATTGGATCTTCAAGATGTTATATCTGAACTTTCCAAGTTACCTGGAGTGGGTCCTAAAGTGGCTGCTTGTATAGCTCTCTACTCGCTTGATCAACACCATGCTATTCCTGTTGATGTTCATGTGTGGAGGATTGCCCAAAAGTATCTCTTACCTGAGCTTGCAGGTTCCAAGTTGACATTGAAGCTTTGCAAACGTGTTGCAGAGGCATTTGTAACAAAATATGGTAAATATGCCGGTTGGGCTCAAGCTGTTTTATTTATTGCTGAGTTGCCTTCCCAAAAGGCCATCCTACCCGAACATTTGAGGACTATCAAACAAGCGAAGCCCGCTAAGATAGAAAACAGTGAAGAAGAATCTGAGTGA 1104 0.4556 MNSLNLQVRIMMKRKRSPKPLPPPPSTPPTPQTQSRHSTNLSKSRLWIPLNLTRQDLSLPLTFPTGQTFRWKNTAPFQYTGVIGSHLVSLKHLQNGDVCYSLHSQSNHDAKTALLDFLNADVSLADTWEVFSANDERFAGLAQHLGGARVLRQDPFECLIQFMCSSNNHISRITKMVDYVSSLGDYLGHVEGFDFHAFPTLHQLSLVSEQQLRDAGFGYRAKYIVGAVSALQSKPGGGEEWLHSLRKLDLQDVISELSKLPGVGPKVAACIALYSLDQHHAIPVDVHVWRIAQKYLLPELAGSKLTLKLCKRVAEAFVTKYGKYAGWAQAVLFIAELPSQKAILPEHLRTIKQAKPAKIENSEEESE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03082 367 Gene3D - 33 119 - -
Vivi3g03082 367 Pfam HhH-GPD superfamily base excision DNA repair protein 160 296 IPR003265 GO:0006284
Vivi3g03082 367 Gene3D - 128 337 IPR023170 -
Vivi3g03082 367 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 31 361 - -
Vivi3g03082 367 MobiDBLite consensus disorder prediction 17 31 - -
Vivi3g03082 367 SMART endo3end 164 336 IPR003265 GO:0006284
Vivi3g03082 367 SUPERFAMILY DNA-glycosylase 154 335 IPR011257 GO:0003824|GO:0006281
Vivi3g03082 367 MobiDBLite consensus disorder prediction 14 40 - -
Vivi3g03082 367 FunFam N-glycosylase/DNA lyase OGG1 275 337 - -
Vivi3g03082 367 SUPERFAMILY TATA-box binding protein-like 40 153 - -
Vivi3g03082 367 Gene3D Hypothetical protein; domain 2 154 278 - -
Vivi3g03082 367 CDD ENDO3c 156 334 IPR003265 GO:0006284
Vivi3g03082 367 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 50 159 IPR012904 GO:0003684|GO:0006289|GO:0008534
Vivi3g03082 367 FunFam N-glycosylase/DNA lyase 154 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03082 K03660 - gmx:100789749 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03082 3 52216183 52218687 Vivi3g03082 3 52216183 52218687 ECH