Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03072 ATGATTCCGCGCCACTTATGGATACCGTCACTACTGTTGTTGCTAGCGTTTCCCTTGTTTTTGGCAGGTGAAGAGGTGGATTCCACCAGAAATAGCATCATCTTCACCACACTTGGCAGAGCTTTCTATGCTTTTGATATCTATTCCCTCCCAATTTCACTACACCAATCACCCAACAACCAAGAGTTACAACTCACTGACGGCCACTCCGTTAATTTTAACGGACACTTTCTTCACAATCACAAATCCATTAAACTCCCATCAGACCAAGAACCACCTTCTCTTGATCTCGTTTACGTCACGGAGAGAAACGGATTTCCCTCTATCTACTACGACGCCGTTTACACAAATACCAAAAACACAACCAGCACAAGAAGATCAAGATCAGCTCTTGAATCTGTCATCACAGAAAGAATTCAACTTCCTTTGTTGCACAATCACCATACAGAAACTCAGAATCAAGTTTCAATCAAAGATAAACCCAGTGTAACCAGCGATGGTGAATATTTAGTCTACGTGTCAACACACGAGAATCCTGGTGTACCACGTGTCAGCTGGACCGCCGTTTATTCCACTCACCTCAAATCAGGTCTCACCCGAAGACTCACTCCCTACGGTGTCGCTGATTTCAGCCCCGCCCTTTCTCCCTCCGGCACATGGACTGCAGTTGCTTCTTATGGCGAACAAGGTTGGTCCGGCGAAGTAGAGGATCTTACTACAGATATCTACGTTTTCCTCACTATAGACGGAAGTCAACGATACAAGGTTGTTGAACACGGTGGCTGGCCGTGTTGGGTTGACGATCGGACTATTTACTTTCACCGGAGAGGCGTTGACAACTGGTGGAGTATTTATAGAGCCATACTCACCACCGATTCTTCAAACTCAGTGATAATCGAACGAGTCACCCCACCGGGTCTACATGTGTTCACACCAGCAACTTCCCCAGGAAACCATAAGTTCATCGCCGTCGCTACAAGAAGACCAGGCTCTAGTTTCCGTCACATAGAGTTGTTTGACCTGGTTAACAACGAGTTCAAGGAGCTAACTCGTTTCGTCTCGCCTCAATCTCACCACCTCAACCCGTTTATCTCACCCGATTCAACACGGGTCGGGTACCACAAGTGTAGGGGTAAGGAAAGTAATACAAGTCCTCAGTTTTTACTAGAGAATGTTCAGAGCCCCGTTCCAAATCTAACACTGTTCCGGTTCACCGGTTCGTTTCCGGTTTTCTCACCCCGTGGAGACCGAATCGCTTACGTTGAGATGCCTGGGGTTTATGTTGTGAACCGGGACGGTTCGAACCTGCGAAAGGTTTCTAACGAGATGGCTTTCTCAACAGCCTGGGACCGGGTTCGAACCGGTATAATCTACACAGCAGTTGGACAAACATTTGCTTCGGAGAGCACGCAGGTTGATATCATCTCCATCGATGTTGATCGGAATATCGTCAAGAAATTGACCTTAGATGGAAAGAACAACGCCTTTCCAGCTCCCTCACCCGACGGAAAATGGATAGTGTTCCGTTCGGGTCGATCGGGTCATAAGAATCTCTACGTGATGGATGCTGTTGAGGGAGAGAAAGAAGGGCTTAGAAGGTTAACGGAGGGTCCATGGACGGATACAATGTGCAACTGGTCACCTAATGGAGAATGGATCGCTTTTGCGTCGGATCGTCATGATCCGGGTAGTGGAAGCTTCGAGATTTATCTGATCCACCCAGATGGAACCGGGTTAAGGAAACTGATTCAAAGTGGGTCGGGTGGGAGGACGAACCACCCGTATTTTAGCCCGGATGGAAAGAGTATTGTGTTTACGTCAGACTATGCGGGTATATCGGCTGAGCCAATTTCAAACCCGCATCATTATCAGCCTTATGGTGAGATATTCACCATTAGATTGGATGGTTCGGGTTTGACGAGATTGACTCATAATTCATATGAAGATGGAACACCTGCTTGGTCACCCAAGTATATCAAGCCAGTGAATGTTGAGAGGCCCAAGGGTGGACCTTATTGTTCTTTTGAGGACTGTCACTGGCTCAACAACATGCCAAATTACACTGGTGTAAAGGTTCAGTGTGCTATGTAA 2091 0.4706 MIPRHLWIPSLLLLLAFPLFLAGEEVDSTRNSIIFTTLGRAFYAFDIYSLPISLHQSPNNQELQLTDGHSVNFNGHFLHNHKSIKLPSDQEPPSLDLVYVTERNGFPSIYYDAVYTNTKNTTSTRRSRSALESVITERIQLPLLHNHHTETQNQVSIKDKPSVTSDGEYLVYVSTHENPGVPRVSWTAVYSTHLKSGLTRRLTPYGVADFSPALSPSGTWTAVASYGEQGWSGEVEDLTTDIYVFLTIDGSQRYKVVEHGGWPCWVDDRTIYFHRRGVDNWWSIYRAILTTDSSNSVIIERVTPPGLHVFTPATSPGNHKFIAVATRRPGSSFRHIELFDLVNNEFKELTRFVSPQSHHLNPFISPDSTRVGYHKCRGKESNTSPQFLLENVQSPVPNLTLFRFTGSFPVFSPRGDRIAYVEMPGVYVVNRDGSNLRKVSNEMAFSTAWDRVRTGIIYTAVGQTFASESTQVDIISIDVDRNIVKKLTLDGKNNAFPAPSPDGKWIVFRSGRSGHKNLYVMDAVEGEKEGLRRLTEGPWTDTMCNWSPNGEWIAFASDRHDPGSGSFEIYLIHPDGTGLRKLIQSGSGGRTNHPYFSPDGKSIVFTSDYAGISAEPISNPHHYQPYGEIFTIRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVERPKGGPYCSFEDCHWLNNMPNYTGVKVQCAM 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03072 696 Gene3D - 142 387 IPR011042 -
Vivi3g03072 696 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 17 681 - -
Vivi3g03072 696 Gene3D - 564 668 IPR011042 -
Vivi3g03072 696 Gene3D - 424 563 IPR011042 -
Vivi3g03072 696 SUPERFAMILY DPP6 N-terminal domain-like 161 441 - -
Vivi3g03072 696 Pfam WD40-like Beta Propeller Repeat 532 570 IPR011659 -
Vivi3g03072 696 Pfam WD40-like Beta Propeller Repeat 591 608 IPR011659 -
Vivi3g03072 696 Pfam WD40-like Beta Propeller Repeat 486 520 IPR011659 -
Vivi3g03072 696 SUPERFAMILY Tricorn protease N-terminal domain 407 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03072 Vivi-Chr3 52070662 52073024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03072 - - mtr:25489690 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03072 3 52070662 52073024 Vivi3g03072 3 52070662 52073024 ECH