Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03006 ATGGCATACTTAGATGAAATAAGAGAGTCTCAAAGAGCTCGTGGCACTGCAACCATTTTAGTTATTGGAACCGCAACTCCACCAAATTGCATTTACCAATCTGATTTTACAGATTATTACTTCCGAGTTACCAACAACAACCACATGCCTCAACTAAAGGAAAAGTTGAAACGTATATGTGAGAAGTCAATGATTAAGAAACGTTACATGCATTTGACAGAAGAAATGTTGAAAGAAAATCCAAACATATCAAGTTATGAGAAATCATCTCTAGACGCACGCCAGGACATTTTGGTTGAAGAAGTACCAAAGCTAGGAGAAAAAGCAGCATCAAATGCCATAAAAGAATGGGGAAGACCAAAATCAGAGATAACTCACCTCATTTTTTGTTCTACTTCAGGTGTCGACATGCCTGGTGCTGATTATTAA 429 0.3753 MAYLDEIRESQRARGTATILVIGTATPPNCIYQSDFTDYYFRVTNNNHMPQLKEKLKRICEKSMIKKRYMHLTEEMLKENPNISSYEKSSLDARQDILVEEVPKLGEKAASNAIKEWGRPKSEITHLIFCSTSGVDMPGADY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03006 142 Pfam Chalcone and stilbene synthases, N-terminal domain 5 142 IPR001099 -
Vivi3g03006 142 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 5 142 IPR011141 GO:0009058|GO:0016747
Vivi3g03006 142 Gene3D - 1 142 IPR016039 GO:0016746
Vivi3g03006 142 SUPERFAMILY Thiolase-like 1 142 IPR016039 GO:0016746
Vivi3g03006 142 FunFam Chalcone synthase 2 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03006 Vivi-Chr3 50625478 50627170 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03006 K00660 - vvo:131661368 290.426