Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02981 ATGGCAACCTTGTTATTTAGAAAATCTAGGACCATATTACTTCACCAACATCTTCAAAATAACCTACCCTTCTTGTTAGGAACAGGAACACGATCACGATTACCATTTTCTTCTCACCCATTTCTTCCATCATCATCGCGTTATGAATCTACAGAGGCTCAGCCACAATTGGAGGATTTGCAGCCTCATGTCACTCACCATGATGATCAGATGCTTGATTTTCCTGGAGGGAAAGTTGGATTCACTTCTGAAATGAGGTTCATTTCTGATACTTCTCACATAAGGGTTCCTTGCTATCGTGTCCTTAACGACGATGGCGAGCTCATGAACCACACCAATCATGTTCCGGTTAGCAAAGAATTGGCAGTGAGAATGCATTCTGAGATGGTCACTCTCCAAACAATGGATAGCATATTCTATGAGCTGCAGAGGCAAGGAAGAATTTCCTTCTACCTCACTACATCAGGAGAAGAAGCTGTTAACATTGCATCAGCAGCTGCACTTTCTTCTCATGATGTTATCTTGCCTCAGTACCGGGAGCCTGGAGTTCTGTTATGGCGTGGTTTCACTCTGCAACAATTTGCTCACCAATGCTATGGAAACACAAATGATTTTGGTAAAGGAAGACAAATGCCAATACACTATGGTTCTAACAAACACAATTACTTCACAGTTTCATCGCCTATTGCAACACAACTTCCTCAAGCTGTAGGCGCTGCTTATTCGCTTAAAATGGACGGAAAAAGTGCTTGTGCAGTAACTTTTTGTGGAGATGGAAGTACTAGTGAGGGAGATTTTCATGCTGCTATGAACTTTGCAGCAGTAATGGACGCACCAGTTGTTTTCATATGTCGTAACAACGGATGGGCCATTAGTACCCCTGTCGAAGAACAATTTCGAAGTGATGGTATTGTGGTGAAAGGTCAAGCTTATGGGATATGGAGTATCAGAGTAGATGGAAATGATGCTCTTGCTGTTTATAGTGCAGTTCATACTGCACGCGAAATTGCTATCAAAGAACAAAGACCAGTTTTAATTGAGGCTCTTACTTATAGAGTAGGACACCATTCTACATCTGACGATTCAACTAAGTATCGATCAACCGGTGAAATCGAATACTGGAAGATGGAAAGGAATCCAGTGAACAGATTCAAAAGATGGGTTGAAAAGAACGGTTGGTCGAGTGAAAAGGATGAATTGGAGCTTAGAAGCAGTGTTAGGAAGCAATTAATGCATGCAATTCAAGTGGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTACTGATGTCTATGACCAAGTTTCATCAAACCTTGAAGAGCAAGAAAGAGAACTTAGAAAAACTATTGAGAAGCATCCCAAAGATTATCCTTCTGATGTTCCTTTGTAG 1395 0.4129 MATLLFRKSRTILLHQHLQNNLPFLLGTGTRSRLPFSSHPFLPSSSRYESTEAQPQLEDLQPHVTHHDDQMLDFPGGKVGFTSEMRFISDTSHIRVPCYRVLNDDGELMNHTNHVPVSKELAVRMHSEMVTLQTMDSIFYELQRQGRISFYLTTSGEEAVNIASAAALSSHDVILPQYREPGVLLWRGFTLQQFAHQCYGNTNDFGKGRQMPIHYGSNKHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGSTSEGDFHAAMNFAAVMDAPVVFICRNNGWAISTPVEEQFRSDGIVVKGQAYGIWSIRVDGNDALAVYSAVHTAREIAIKEQRPVLIEALTYRVGHHSTSDDSTKYRSTGEIEYWKMERNPVNRFKRWVEKNGWSSEKDELELRSSVRKQLMHAIQVAEKAQKPPLEDMFTDVYDQVSSNLEEQERELRKTIEKHPKDYPSDVPL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02981 464 Coils Coil 433 453 - -
Vivi3g02981 464 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 67 462 - -
Vivi3g02981 464 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 67 463 - -
Vivi3g02981 464 MobiDBLite consensus disorder prediction 440 464 - -
Vivi3g02981 464 Gene3D - 67 462 - -
Vivi3g02981 464 CDD TPP_E1_PDC_ADC_BCADC 125 417 - -
Vivi3g02981 464 Pfam Dehydrogenase E1 component 129 424 IPR001017 GO:0016624
Vivi3g02981 464 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 96 459 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02981 Vivi-Chr3 49763808 49767950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02981 40 301 Acyl Lipid Metabolism Gene Families AT1G21400 69.847 8.23e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02981 K00166 - gmx:100796766 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02981 3 49763808 49767950 Vivi3g02981 3 49763808 49767950 ECH