Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02963 ATGAACAAAAAAAACAGTATGAAAAACAAAACTATGGAAATCCAAGTGCCAGTTGTGATAGTAGGTGCTGGGCCTGCTGGATTAGCAACCTCTGCATGTCTCAACAAACTTTCAGTTCAAAACATTGTTCTAGAAAGAGATGATTGTCATTCTCCTGTTTGGAGGAAAAGAACCTATGATCGTTTGAAACTTCACTTGGGTAAAAGCTTTTGTAACCTGCCTCACATGCCTTTCTCATCTGATCTTCCGGTGTTTATCCCTAGGGTTGATTTTCTTCGCTATTTGGACGATTATGTGAGCACTTTTAAGATCTCCGTCCGCTGCAACCGGTGTGTCCATGAAGCTTCGTTCGATGTCAAAACCGGGAAATGGAGGGTTTGTGCAGTGGATAGTGTGAAAAATGTTGGTGAAGTTTATGTTGCTGATTATGTAGTGGTTGCATCGGGAGAAAGCTGTGATGCTTATATTCCAAAGATAGTCGGGCTTGAAAAGTTTGAAGGTGAATATTTTCACTGCCACAAGTATCAAAATGGAAGGCCTTTTTATGATAAGAATGTGTTGGTTGTTGGTAGCGGAAATTCGGGTATGGAGATTGGTTATGATCTGTCTACTTGGGGGGCGAATAGCTCCATGGTTATAAGAAGTCCGGTACATTTTTTGATAAAGGAAATGGTGTACATTGGAATGTCTTTGCTGAAATACTTGAGTGTTGAAAATGTGGATAAACTTATGTTCTTTATGAGCAAATTGGTGTATGGAGATTTGTCAAAGTATGGATTGGTTAGACCAAAGGAAGGACCCTTTGCCTTGAAATTGAAGGGCGGTCGTACTCCTACGGTTGATGTTGGTACCATCAAACACATCAAACAAGGAAAAATCAAGGTATATTCAGAAATTTCAAGCATAAAAGGCGGCAAGACTATTGAATTTATAGATGGAAAAACTGGTCATTTTGACGTCATTATCTTTGCTACGGGATATAGAACCAATGTGCACAAGTGGCTTAAGGATTACAAAGAGCTGTTTAATGAAAATGGATTGCCAAAACCTGCTTATCCAAATCACTGGAAAGGGGAGAATGGACTCTATTGTGTTGGATTTTCAAGAAGGGGATTACAAGGCATTAATTATGATGCTCAGAAAGTAGCAACGGATATCAGTGTCAATATCAAGACAAAGAAGATACATGCAACTGATGATGAGGACAAAATTGCTCAAATCAAGCTATTAGATGAATGA 1239 0.3906 MNKKNSMKNKTMEIQVPVVIVGAGPAGLATSACLNKLSVQNIVLERDDCHSPVWRKRTYDRLKLHLGKSFCNLPHMPFSSDLPVFIPRVDFLRYLDDYVSTFKISVRCNRCVHEASFDVKTGKWRVCAVDSVKNVGEVYVADYVVVASGESCDAYIPKIVGLEKFEGEYFHCHKYQNGRPFYDKNVLVVGSGNSGMEIGYDLSTWGANSSMVIRSPVHFLIKEMVYIGMSLLKYLSVENVDKLMFFMSKLVYGDLSKYGLVRPKEGPFALKLKGGRTPTVDVGTIKHIKQGKIKVYSEISSIKGGKTIEFIDGKTGHFDVIIFATGYRTNVHKWLKDYKELFNENGLPKPAYPNHWKGENGLYCVGFSRRGLQGINYDAQKVATDISVNIKTKKIHATDDEDKIAQIKLLDE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02963 412 Pfam Flavin-binding monooxygenase-like 18 330 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vivi3g02963 412 SUPERFAMILY FAD/NAD(P)-binding domain 182 372 IPR036188 -
Vivi3g02963 412 Gene3D - 15 396 IPR036188 -
Vivi3g02963 412 SUPERFAMILY FAD/NAD(P)-binding domain 11 254 IPR036188 -
Vivi3g02963 412 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Vivi3g02963 412 PRINTS FAD-dependent pyridine nucleotide reductase signature 18 37 - -
Vivi3g02963 412 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Vivi3g02963 412 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Vivi3g02963 412 PRINTS Pyridine nucleotide disulphide reductase class-II signature 17 39 - -
Vivi3g02963 412 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02963 Vivi-Chr3 49571483 49573500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02963 K11816 - gmx:100818396 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02963 3 49571483 49573500 Vivi3g02963 3 49571483 49573500 ECH