Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02921 ATGGTTCTCACATCGTCTGCGCGCGATTACTTCAACCGCATCTTGCAGGACATCTCCGGCATGAAGGTTCTAATCCTTGATTCCCAAACGGTCAGTATTGTGAGTGTTGTGTACTCACAGTCAGAACTTCTTCAGAAAGAAGTATTTTTGGTAGAATTGGTGGATTCAATTTCCAAGTCAAACGAACCAATGTCGCATCTCAAAGCCATTTACTTCCTTCGACCTACATCAGAGAATATTCAGTTTATGCGCCGGCAGCTGGCTAGTCCTAGATTTGGAGAGTATCACCTTTTTTTCTCCAACATAATGAAGGACCATCATATTCACTTACTTGCTGATTCAGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTTCTATGCAGACTTTGTTGCTATTGATCCTTATCATTTCACTTTCCACGTGCCTTCAAATTACATTTATATGCTCCCAGCTGTCATAGACCCTTCAGCATTGCAGCGTTTCAGTGATCGGGTTGTTGAAGGTCTGGCTGCTGTTTTTTTGGCATTAAAACGGAGACCTGTAATTAGATATCAAAGAACATCCGACATTGCAAAAAGAATAGCACAGGAAGCAGCTAAACTGATGTACCAAGAGGAAAGTGGTCTTTTCGATTTTAGACGAATGGAAGTTTCTCCATTGTTGTTGGTAATTGACAGGAGGGATGACCCTGTAACCCCGTTGCTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTGATAGGAATCCAGGATAACAAAGTGGACGTCAAATCCATTGGTAAATTTCCGAAGGATCAGGAGGAGGTTGTGCTGTCATCAGAACAAGATTCCTTTTTCAAAGCAAACATGTATGAGAATTTTGGAGACATTGGTATGAATATCAAGCGATTGGTTGATGAGTTTCAACAAGTGGCAAAGAGCAATCAGAACATCCAAACAGTAGAGGACATGGCCAAATTTGTTGATAACTACCCTGAGTACAGAAAAATGCATGGGAATGTGACAAAACATGTGACTCTGGTAACAGAAATGAGCAAGATAGTTGAAGAGCGAAAACTTATGTTAGTTTCACAAACAGAACAGGAGTTGGCTTGCAATGGAGGGCAAGGAGCTGCTTTTGAGGCAGTGACAAATCTACTAAATAATGAAAGCATATCAGATTTAGATCGACTACGTTTGGTCATGCTATATGCTTTGAGATATGAGAAGGACAGCCCTGTTCAATTAATGCAGCTTTTCAACAAACTGTCTTCCAGATCTGCCAAATACAAACCCGGGCTTGTCCAGTTTCTTTTGAAGCAAGCAGGTGTTGACAAGAGAACTGCTGATCTTTACGGAAATCGAGATCTAATGAATATTGCCCGTAACATGGCACGTGGACTTAAGGGTGTTGAGAATGTTTACACCCAGCATCAGCCACTTCTGTTCCAAATAATGGAAAGCATTGTCAAAGGGCGGTTGAGAGATGTAGACTACCCATTTTTTGGGAATCACTTCCAACAAGGAAGGCCTCAGGATGTAATTATCTTCATTGTTGGTGGGACAACATATGAGGAGTCACGGTCTGTTGCTCTGCAAAATGCCAGCAATACAGGCGTTCGGTTTATACTTGGCGGCTCTTCTGTTCTTAATTCTAAAAGGTTTTTCAGGGACTTGGAAGAAGCTCAAAGGGTAGCTCGTTCTAGCACCTCTGTTGTTTGA 1707 0.4177 MVLTSSARDYFNRILQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSNEPMSHLKAIYFLRPTSENIQFMRRQLASPRFGEYHLFFSNIMKDHHIHLLADSDEQEVVQQVQEFYADFVAIDPYHFTFHVPSNYIYMLPAVIDPSALQRFSDRVVEGLAAVFLALKRRPVIRYQRTSDIAKRIAQEAAKLMYQEESGLFDFRRMEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDVKSIGKFPKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTVEDMAKFVDNYPEYRKMHGNVTKHVTLVTEMSKIVEERKLMLVSQTEQELACNGGQGAAFEAVTNLLNNESISDLDRLRLVMLYALRYEKDSPVQLMQLFNKLSSRSAKYKPGLVQFLLKQAGVDKRTADLYGNRDLMNIARNMARGLKGVENVYTQHQPLLFQIMESIVKGRLRDVDYPFFGNHFQQGRPQDVIIFIVGGTTYEESRSVALQNASNTGVRFILGGSSVLNSKRFFRDLEEAQRVARSSTSVV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02921 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Vivi3g02921 568 Gene3D - 152 555 IPR027482 -
Vivi3g02921 568 Gene3D - 2 128 IPR043154 -
Vivi3g02921 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 554 IPR001619 GO:0016192
Vivi3g02921 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 4 556 IPR036045 -
Vivi3g02921 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Vivi3g02921 568 Gene3D - 353 474 - -
Vivi3g02921 568 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Vivi3g02921 568 FunFam Vacuolar sorting protein 3 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02921 Vivi-Chr3 48736080 48742418 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02921 K12479 - gmx:100782786 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02921 3 48736080 48742418 Vivi3g02921 3 48736080 48742418 ECH