Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02916 ATGAGGTATGTGTGTTTGTATCAGAGAGCATATAGCATAAGAGAAATGAAGAGGAGTAGAGATACTGAGAAGAGATCAGAGATAAACTCTGCCATTGAAGAACTTTCAGTTCTTGTTATAGTCAAACCTGGAGAAAATCATGAAGCTGCACCTGCACGCATCCCAACCAAGCCTTTCCTATCTCTATGTTACATGATTCTACAATTTCTTGATAAGGTAGGCCCAACAATGATTGTTATTAGACAAGACATTCACCAGAATATTAAGAGGTTGGAAGCTATGTATGAATCAAACCCTTTGATCAATTCAAATTTGGTTGAGATATTGAAATCAGAAACTAGCAAAGGCATTGCAAAGAAGAGGATTAGTGGCAGTAAATCCTTTGTTTGGCTTACTAGATCCATTGATTTCACATCAGCATTGTTACAAGCATTACTAGTAAAAGATCCTAAAAAGAGTATGGAACAAGCAGTTCAAGAGTCTTATGATGCAACTTTGAAACCGTGGCATGGATGGATTGCATCCGCGGCTTTCAGAGTTGGTATAAAGCTAGTACCTGATACTAAAACTTTCATGGATCTCATCAGTGAAAAAGGCGAAGATTGTGACATCCTAATGGAGAAAATTCAGATTTTGGTTTCATTGCTAGTACCATTTCTGGAGGATATCCATTGTATTCTAAAAGTGTATAAATTGGACAAGCTTAAATCAAACTGA 717 0.3682 MRYVCLYQRAYSIREMKRSRDTEKRSEINSAIEELSVLVIVKPGENHEAAPARIPTKPFLSLCYMILQFLDKVGPTMIVIRQDIHQNIKRLEAMYESNPLINSNLVEILKSETSKGIAKKRISGSKSFVWLTRSIDFTSALLQALLVKDPKKSMEQAVQESYDATLKPWHGWIASAAFRVGIKLVPDTKTFMDLISEKGEDCDILMEKIQILVSLLVPFLEDIHCILKVYKLDKLKSN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02916 238 SUPERFAMILY Glycolipid transfer protein, GLTP 52 235 IPR036497 -
Vivi3g02916 238 FunFam Glycolipid transfer protein 2 17 233 - -
Vivi3g02916 238 Gene3D Glycolipid transfer protein 16 234 IPR036497 -
Vivi3g02916 238 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 21 226 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vivi3g02916 238 Pfam Glycolipid transfer protein (GLTP) 54 196 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02916 Vivi-Chr3 48688012 48689718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02916 27 223 Acyl Lipid Metabolism Gene Families AT2G34690 16.751 3.01e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02916 - - gmx:100527808 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02916 3 48688012 48689718 Vivi3g02916 3 48688012 48689718 ECH