Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02909 ATGCAGAGCAAGGGATCGAGACACCGATTTTCCACCATGGCGAATCGATCCCGAATCCCTTCACTATTCATCTCCATGTTCGCCACCTTCGCTTCTATCTACGTCGCCGGAAGGTTGTGGCAGGACGCACAGAATCGTGTTTATCTCATCAAAGAGCTCGATAGGATTACAGGTCAGGGAAAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGATGCACTTAAGGTGGAACTTGATGCTGCTAAACAAGAGGGTTTTGTTTCAAAGGGCTTGAGTGAGAGCAATGGGACTTACTCTAAGAGAAGGCCTTTGGTAGTCATAGGTATACTGACAAAGTTTGGCCGCCGGAAGAATAGAGATGCCATTCGCAAGGCCTGGATGGGAAACGGTGCATCTTTGAAGAAAATTGAAGAAGGAAAGGGCATCATTCTGCGATTTGTTATTGGTAGAAGTGCAAATCGCGGGGACAGTCAAGACAAAGACATTGATCGTGAGAATGCGTTGACGAATGACTTCCTAATTCTAGATGATCACGTGGAAGGATCCCAGGGGCACGCCGAGAAGGCTAAATTGTTTTTTGCTCACGCTGCAGATGAATGGGATGCGGAGTTCTATGCCAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCCACTAATTTGGAGAAACCTCGGATTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAACAGAACCATAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCGTACTTTCGTCATGCATCAGGAGAGATGTATGTTATATCACAAGCTTTGGCTAAATTTATATCAATAAACAGATCCATTCTTCGTACATATGCCCATGATGATGTGAGTGCTGGATCCTGGTTTATTGGACTTGATGTGAAGCATATTGACGAGGCAAAGTTTTGTTGCTCGTCTTGGTCAACAGGAGCAATTTGTGCGGGTGTTTGA 1029 0.4393 MQSKGSRHRFSTMANRSRIPSLFISMFATFASIYVAGRLWQDAQNRVYLIKELDRITGQGKSAISVDDTLKIIACREQHKKLDALKVELDAAKQEGFVSKGLSESNGTYSKRRPLVVIGILTKFGRRKNRDAIRKAWMGNGASLKKIEEGKGIILRFVIGRSANRGDSQDKDIDRENALTNDFLILDDHVEGSQGHAEKAKLFFAHAADEWDAEFYAKVNDDVYVNIDALGATLATNLEKPRIYMGCMKSGEVFSEQNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHIDEAKFCCSSWSTGAICAGV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02909 342 Coils Coil 75 95 - -
Vivi3g02909 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 92 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi3g02909 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi3g02909 342 Gene3D - 110 334 - -
Vivi3g02909 342 FunFam Hexosyltransferase 105 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02909 Vivi-Chr3 48492233 48502276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02909 21 342 Glycosyltransferase AT5G53340 72.360 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02909 K20854 - gmx:100779561 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02909 3 48492233 48502276 Vivi3g02909 3 48492233 48502276 ECH