Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02908 ATGGAGTACGAATATAACAGAAGCAGATCCGGCCCCCAAGTTCCGATGTACCGTGCTCCGCCCTCTTCCATCTACCCCAAGATCGGTCCTCACCCTCAAACCGCCGCCCCTCCCCCGCCTCGTCCATTTCCTTATCAGCACAATCCCACTCCTTCACCTTCTCTTGGATTGGGCATTAAGGTTGCTATCAAGCCGGAATTTAGGATCACACAACCGCCTCATTTATTACCACATGTGGGAGATATTCCACGGAGCAACTTCCAATTTGATTTTGGATTGGAGAGGAAAATTTTGGCCGAAGCTGAGAAGGATAACCCAAATTGGACCAAATTTGGGGTAGAAAATCTTCCAACTAAAGCTTCTGATACATCCTCGTCAAAGGTTACTTCTTCAGACCCCGTTGTGAGCAAGTATATAGCCATGGGACTCAGCCGAGAGGCAGTTCAAATTGCTGTTACAAATTATGGTGATAATCCAACCAAAGTTCAAGAATTTGTCAACGGATACACCCTTCTGCGTGAAATGGGATTTTCATCAAACAGCGTTGCAGAAGCCTTAGTTATGCATGACAATGATACAGACAAGGCATTGGCACATTTCCTTAATGGCTCATCATGA 618 0.4595 MEYEYNRSRSGPQVPMYRAPPSSIYPKIGPHPQTAAPPPPRPFPYQHNPTPSPSLGLGIKVAIKPEFRITQPPHLLPHVGDIPRSNFQFDFGLERKILAEAEKDNPNWTKFGVENLPTKASDTSSSKVTSSDPVVSKYIAMGLSREAVQIAVTNYGDNPTKVQEFVNGYTLLREMGFSSNSVAEALVMHDNDTDKALAHFLNGSS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02908 205 Gene3D UBAP1 SOUBA domain 118 204 IPR042575 -
Vivi3g02908 205 CDD UBA2_UBAP1_like 165 201 - -
Vivi3g02908 205 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 161 203 IPR015940 -
Vivi3g02908 205 PANTHER LD44032P 35 203 IPR038870 GO:0000813|GO:0043130|GO:0043162
Vivi3g02908 205 MobiDBLite consensus disorder prediction 1 50 - -
Vivi3g02908 205 MobiDBLite consensus disorder prediction 25 49 - -
Vivi3g02908 205 SUPERFAMILY UBA-like 161 203 IPR009060 GO:0005515
Vivi3g02908 205 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 127 204 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02908 - - tpra:123909312 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02908 3 48486309 48490092 Vivi3g02908 3 48486309 48490092 ECH