Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02898 ATGGTGGATTCAGACCGAATCCAAAACCCATGGATGGCGTCGGAACAAACTTCAATGAATCTCAACAACGCTGCTACATACCGTTCTTCTCCGAAGAAATCGTCAAATAGTGATAAATTAGGGATTGCTGAACGCGCTTTCTCTGCCGCCGGCGCCGCTGTTCTCTCCGCCGTCATTGTTAACCCCCTTGATGTTGCCAAGACAAGGTTGCAAGCACAAGCTGCAGGAGTTGCTTATTCTCATCCACTCAGTAATTTGATCAGCAGAATGTCTTGTTTTGGCCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCGTCGTGTACCCGGGCTGGATTTCATGGCACTGTATCACTCTGTCCTCCTGATTGTTTTCGGTACAAAGGAACACTAGATGTCATGTATAAAATTACTCAACAGGAAGGATTTACTAGGCTATGGAGAGGAACCAATGCAGGCCTCGCACTCGCAGTACCGACTGTTGGAATTTACCTTCCCTGCTATGACATATTTCGCAACTGGTTCGAGGAATATACAGCCAAAAATGCCCCTATTGCAACTCCGTATGTACCTTTAGTGGCTGGTTCATTGGCACGCTCACTGGCTTGTGCAACTTGTTATCCTATTGAACTTGCCAAAACTCGCATGCAGGCATTTAAAGAGACTCAAGTCGGTAAAAAGCCACCTGGAGTATACCAGACTTTGTTAGGTGTTGTCTCTAATGTCAAGGGCACAAGTAATTCACCGAACAGCTTACAAGGTTACCGTGCCCTGTGGACTGGCATGGGTGCGCAGCTTGCTCGCGATGTTCCATTCTCTGCAATTTGTTGGTCGACACTTGAGCCTACTAGAAGGAAACTTATTAGTTTGGTTGGAGGCGATGATGCCGGTATATTGAGTGTTCTTGGCGCAAATTTTTCAGCTGGTGTTGTTGCAGGAACTCTAGCGGCTGGAGCTACGTGTCCACTAGATGTTGCAAAAACTCGAAGACAGATAGAGATGGATCATGTCAGAGCTTTGAAGATGACTACTAGACAGACACTGATAGAGATATGGAGAGACGGAGGCTTGAAAGGGCTTTTTACTGGTTTTGGTCCGCGAGTTGGTCGAGCTGGCCCCTCTGTTGGAATCGTGGTTTCGTTTTATGAAGTTGTGAAGTTTGCCTTAAATCACCGGAACGTAACAACGTGA 1191 0.4626 MVDSDRIQNPWMASEQTSMNLNNAATYRSSPKKSSNSDKLGIAERAFSAAGAAVLSAVIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMSCFGPNMMFADLRCSPSCTRAGFHGTVSLCPPDCFRYKGTLDVMYKITQQEGFTRLWRGTNAGLALAVPTVGIYLPCYDIFRNWFEEYTAKNAPIATPYVPLVAGSLARSLACATCYPIELAKTRMQAFKETQVGKKPPGVYQTLLGVVSNVKGTSNSPNSLQGYRALWTGMGAQLARDVPFSAICWSTLEPTRRKLISLVGGDDAGILSVLGANFSAGVVAGTLAAGATCPLDVAKTRRQIEMDHVRALKMTTRQTLIEIWRDGGLKGLFTGFGPRVGRAGPSVGIVVSFYEVVKFALNHRNVTT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02898 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 40 174 IPR018108 -
Vivi3g02898 396 Gene3D Mitochondrial carrier domain 12 93 IPR023395 -
Vivi3g02898 396 Gene3D Mitochondrial carrier domain 121 395 IPR023395 -
Vivi3g02898 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 186 286 IPR018108 -
Vivi3g02898 396 PANTHER FI19922P1-RELATED 26 393 IPR045315 GO:1990542
Vivi3g02898 396 Pfam Mitochondrial carrier protein 189 287 IPR018108 -
Vivi3g02898 396 Pfam Mitochondrial carrier protein 40 177 IPR018108 -
Vivi3g02898 396 Pfam Mitochondrial carrier protein 304 391 IPR018108 -
Vivi3g02898 396 SUPERFAMILY Mitochondrial carrier 39 384 IPR023395 -
Vivi3g02898 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 300 388 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02898 Vivi-Chr3 48240360 48244355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02898 136 387 Organic Solute Cotransporters AT3G55640 27.132 2.34e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02898 K15119 - gmx:100810960 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02898 3 48240360 48244355 Vivi3g02898 3 48240360 48244355 ECH