Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02892 ATGGTTACATTCAAAAGGGTGATAAGGAAGAAAAGCACAGAGGAATTTTCATGCATTCCTTACATGATTGGATTGTTGAACTGTCTCCTTTTCACATGGTATGGGTTACCTATTGTGAGCTACAAATGGGAAAATTTTCCTGTTGTAACGGTTAATGGAGTTGGAATTGTTCTTGAGTTTTGCTACGTGGTCATTTATTTCTGGTATTCTTCACCCAAAACAAAGGTGAAGGTAGCTATGATTACCACATTTGTTCTAGCTGTGTTCGGCGTAACTGCAGCAGTTTCGGCTTTTGTCTTACACGATAGTCCTCATCGAAAGCTACTCGTTGGTAGTGTGGGATTATGTGTTTCTGTTGCATTGTACGGTTCTCCTCTCGTTGCAATGAAGAAAGTTATAAAGACAAAGAGTGTGGAGTTTATGCCATTGGCGTTATCTCTGTGTGCTTTTTCTGCTAGTGTATTATGGTTAGCTTATGGAATTCTCGTTCGAGATGTATTCGTCGCGGGTCCGAGTGTGGTTGGAACTCCATTGAGTATTTTGCAGCTTGTGATATACTTCAAGTACAGGAAAGAGAGAGTTGTGGGTGAAGCTAAAATTGGGGATTTGGAAAAGGGTGGGTTAGAGTTAGAGAATGTGGTGGAGTTAGATTTGGAAATGGGGAAAGTGGAAAAGATTGTCACAAAATGTGAACAATGTTGA 702 0.4031 MVTFKRVIRKKSTEEFSCIPYMIGLLNCLLFTWYGLPIVSYKWENFPVVTVNGVGIVLEFCYVVIYFWYSSPKTKVKVAMITTFVLAVFGVTAAVSAFVLHDSPHRKLLVGSVGLCVSVALYGSPLVAMKKVIKTKSVEFMPLALSLCAFSASVLWLAYGILVRDVFVAGPSVVGTPLSILQLVIYFKYRKERVVGEAKIGDLEKGGLELENVVELDLEMGKVEKIVTKCEQC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02892 233 PANTHER RAG1-ACTIVATING PROTEIN 1 3 193 IPR047664 -
Vivi3g02892 233 FunFam Bidirectional sugar transporter SWEET 106 199 - -
Vivi3g02892 233 Gene3D - 109 198 - -
Vivi3g02892 233 FunFam Bidirectional sugar transporter SWEET 1 75 - -
Vivi3g02892 233 Gene3D - 1 75 - -
Vivi3g02892 233 Pfam Sugar efflux transporter for intercellular exchange 3 73 IPR004316 GO:0016020
Vivi3g02892 233 Pfam Sugar efflux transporter for intercellular exchange 109 192 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02892 Vivi-Chr3 48092237 48093982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02892 1 225 Miscellaneous Gene Families AT5G53190 54.310 2.62e-87 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02892 K15382 - gmx:100813119 318.546