Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02885 ATGAACAATAACGTGATTTCTTCTTTGTTTCAGGTTTTTGAATTTGGATCAGTGCCTTTGAAGACTTACTTACCTGATGGAGATATTGATCTCACAGTTTTTGGCATCAGACAAATTTTGCCTGAAAATTCCATTCATGAGATTCTGCAAATCATACAGAATCAAAAGGAAAATGAGTTTGCTGAGTTTAGGGTTAAAGAGGTTAAGCTTGTCCAAGCAGAGGTGAAGGTTATAAAGTGCTTGATTGACAGTTTTGCGGTTGACATATCTTTCAATCAATTGAGTGGTTTATGTTCACTTTGTTTTTTAGAGGAGGTTGATCATTTGATTGGACATAATCATATGTTCAAGCGCAGTGTGATATTGATAAAGGCTTGGTGTTACTACGAGAGCCGAATCCTGGGTTCCAACAGTGGACTCTTTTCAACCTATGGGTTGGAAATTTTGGTATTATACATATTTAATCTTTACAACAATGATTTTGCTGGACCACTTCAGGTACTATTTCGATTTCTGGAGTTCTTCGGTAAATTTGACTGGGAAAACTATTGTGTTAGCTTGAGTGGACCAGTGCCCAAAAGCTCACTTCCTAATATGATAGCCGAGTCTCCAAGAAAAGATTGCCAAGGCCAAGACTTACTGCTCACCGAGTTGTTTCTTAATGCTTGTAAGACTTGTTACGGTAATATGCCGCGCAGTCTGGAAAATGACGAGAAACATTTTGTTACCAAATATATTGATATTATAGATCCTTTGTGTGCTTACAACAATCTGGGGCGTAGCGTCAATAAAGGTAGCTTCTTTAGGATAAAGAATGCAATTGCTTTTGGTGCTAAGAGGATACTGAGAATTCTCGAATGCACGGATGAGAATTTAATCGCTGAATTTGATTACTTTTTCAAAAGCACATGGAATAGAAATGGGAATGGTTATTGGATTCATGTAAATGTTTATAATCTTTATGTAAGAAATAAAAAAATTGGAAAGTCAGCGCGTCAAGAATCTGAGGATGAACAGGCTCTAGCTTCTCGTGAGTCTCAATATAATAACCAAAAGCCTGATAACCAATTATCAGATATGGGACTGCATAAGGAAGAGCCTGATTGTTTGAATATCTCAGAAAGTAGAAGTACTCTTAAGGTGAGTGGATATTTGCATGCACTGATGGGTCAGTCTGCTGCTAAGGAAGAACCTGGTGTTGGGAATATGACTGAAAATAACAGGATTGAATATCTGGAAGCAGTAAAAGGTACAAATTTAAAAAACAATGAGGCAGTGAGGCAGCAAGAGGAAGAGCATCATTTTGAGAGTACTACGAAAAGTTGTACGAGTCTCAAGTCCAAAGGATACTTGCAGGCACTTTTGGGAGTGAAAAAAAGTGATGCATCTTTTTCACCACCGCCACAAAACATATCTTGCTCTCTAGATGTAGTTCAATTTCCGGAACTACAAGGGTTTCCCCGTGGCAGAAGCTCATTAAATTTGGGACAAGGCAGTGTTCATCCACCTGCTGTAATAATCACAGATAGTATTGTGATGAACCCAGAAATCTGTAAAAACACACCAGCTTCAGACTCAACCTCAGAGACCAGATTCTCATCCTTGCCTCTGAAACCAACTCATGGTCCATCAATTGAGAAGGCAGACATCTTCAGGCATGAGAACACCACTGCTGAATCTGACGCCTTAAATGTTCATGCGCTTCAATCACCATATGCATCTGGTTCATCTAAGATACAATTTCCATTCTCAATCAGCAATAGCAGTCATGTTGAAGCTTCACATTATTTAGGGAACCAATTTTCAGATATTTTTAATGGTGATTTTGTAAAATATTGGACAAATCTTCAATATGGGCGATACTGCGAGATTGAACCATTAGAGCCTTTGCCTTATCCTCCCATTTTTGAACTGCCAATGGATTTTCAAGAGCAATATCATTTGAATAGGCAGCCTTCAAGTTCTGCGAACGTTGTGGCTCCCGTAGTTCCTGACATGCCACCAACACTTGCTTCTGACTCGCATGAAGGCATAAATCAAAGCGTTTCTTTTTGGCTTCCCAGACTTAGTGGAGGCACTGGGTCTTTCATGCCAAATCCACTTGTTTACAACCAGAAATATTATGACCGTGAGCTTTACAACAAACATCAGAATGCAAATTACAGATCTGAGAGACCAGGGAATTCGAATTTCAGCTCAAGGGGAAGGGCTTCTAGATCCAACAATGTGCCACGAAATTTGAATTCCAATTTCAGGGAAAGGTTTTCCAGCCGTGGCCAGAATCATTATAGACAACGTGAGAAACTAGAAGGTAAAAAGAAAGCATTGCATCAAGGTGAAGGGTCAAGTAGTGCCGTTAATAAACTTGGAAATTTTGAAAAGGGTTCGAAAGATATTTCTCCATATCAGCGCTGA 2415 0.3917 MNNNVISSLFQVFEFGSVPLKTYLPDGDIDLTVFGIRQILPENSIHEILQIIQNQKENEFAEFRVKEVKLVQAEVKVIKCLIDSFAVDISFNQLSGLCSLCFLEEVDHLIGHNHMFKRSVILIKAWCYYESRILGSNSGLFSTYGLEILVLYIFNLYNNDFAGPLQVLFRFLEFFGKFDWENYCVSLSGPVPKSSLPNMIAESPRKDCQGQDLLLTELFLNACKTCYGNMPRSLENDEKHFVTKYIDIIDPLCAYNNLGRSVNKGSFFRIKNAIAFGAKRILRILECTDENLIAEFDYFFKSTWNRNGNGYWIHVNVYNLYVRNKKIGKSARQESEDEQALASRESQYNNQKPDNQLSDMGLHKEEPDCLNISESRSTLKVSGYLHALMGQSAAKEEPGVGNMTENNRIEYLEAVKGTNLKNNEAVRQQEEEHHFESTTKSCTSLKSKGYLQALLGVKKSDASFSPPPQNISCSLDVVQFPELQGFPRGRSSLNLGQGSVHPPAVIITDSIVMNPEICKNTPASDSTSETRFSSLPLKPTHGPSIEKADIFRHENTTAESDALNVHALQSPYASGSSKIQFPFSISNSSHVEASHYLGNQFSDIFNGDFVKYWTNLQYGRYCEIEPLEPLPYPPIFELPMDFQEQYHLNRQPSSSANVVAPVVPDMPPTLASDSHEGINQSVSFWLPRLSGGTGSFMPNPLVYNQKYYDRELYNKHQNANYRSERPGNSNFSSRGRASRSNNVPRNLNSNFRERFSSRGQNHYRQREKLEGKKKALHQGEGSSSAVNKLGNFEKGSKDISPYQR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02885 804 SUPERFAMILY Nucleotidyltransferase 8 134 IPR043519 -
Vivi3g02885 804 Gene3D Beta Polymerase, domain 2 3 92 IPR043519 -
Vivi3g02885 804 MobiDBLite consensus disorder prediction 718 804 - -
Vivi3g02885 804 MobiDBLite consensus disorder prediction 719 756 - -
Vivi3g02885 804 SUPERFAMILY PAP/OAS1 substrate-binding domain 115 285 - -
Vivi3g02885 804 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 10 787 - -
Vivi3g02885 804 MobiDBLite consensus disorder prediction 757 777 - -
Vivi3g02885 804 MobiDBLite consensus disorder prediction 332 362 - -
Vivi3g02885 804 Gene3D - 93 300 - -
Vivi3g02885 804 MobiDBLite consensus disorder prediction 342 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02885 Vivi-Chr3 47986880 47992850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02885 - - psat:127082195 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02885 3 47986880 47992850 Vivi7g04270 7 111327615 111335117 PCT