Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02814 ATGGAGTCACTAGAAATTCCTCGTCTCCTTCTCCATCATCACCATCCCCGTGCATCTTCATCTCCATCTCGACCTCTTTCCAATTCAAGATTCTTGCCACAATTGTGTTTTCCTTCTAACCTCAAAAAAGCTACTAAAAATGCTACCTTAAGATCAGTTTCCGGTGATACTGATGGTGGTCCCCCCGCTTCACCAGACGGACCTGTTTCCTTTGAAGATGATGAAATTCAACAGCGTGATGAAGATAGAGCTCTCTTGTTGTCTAAAGAGATTGATGATTTTGGCTCTCTTGTTGGATTTCGTTTGAGTACTACTGACTCTGGGAAAACTACTACTACTGATACTCATCGAGGGGAATTAAGGAGTGATGAAGTTGAAGAACCGGGGGATACAAATGTAGGAGAAGATAAGGCTGAGATTAGAGTGTCCCACAATATTGTTTTTGTGACATCAGAAGCTGCGCCGTATTCGAAGACTGGTGGACTTGCTGATGTTTGTGGTTCTTTGCCAATAGCGCTGGCGGGTCGGGGACATCGTGTTATGGTTATCTCTCCTAGATACCAACATGGTACTGCTGCAGATAAGAAGTTTTCTAGTGCGGTTGATCTTGATAGAAATATCAACGTATTTTGCTTTGGTGCTGCTCAGGAAGTTGGCTTTTACCATGAGTATAGGGAAGGGGTTGATTGGGTATTTGTCGATCACCCTTCATTCCATAGACCAGGGAATCCTTATGGGGACAAGATTGGGACTTTTACGGATAATCAGTTTCGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCCCCATTGGTGCTTCCATTGGGAGGTTTCACTTATGGAGAAAAATGTCTATTCCTTGTTAACGATTGGCATGCCAGCCTAGTTTCAGTACTTTTGGCAGCCAAATATCGTCCATATGGGGTATATAAGGATGCACGTAGCATATTAGTGATTCACAATATTGCACACCAGGGAGTGGAACCTGCAATTACGTATAGCAATTTAGGGCTGCCTCAAGAATGGTATGGAGCACTTGGATGGGTGTTCCCTACATGGGCGAGGACGCATGCTCTTGATACAGGCGAAGCTGTCAATTTTTTAAAAGGCGCCATTGTTACAGCTGATCGAATAGTAACAGTCAGCAAGGGCTATTCATGGGAGATAACAACTAATGAAGGTGGATTCGGTCTTCATGAAATATTACGCGATAGAAAAAGTATTCTCAGCGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCATCAACCGATGAACATCTTGCTAGCAACTACTCTGCCGAAGACATTTCTGGGAAGGTGAAATGTAAGGTTGCCTTGCAGAAGGAATTGGGTCTTCCAGTGAGGCCTGACTGTCCGATGATTGGGTTTGTTGGAAGACTTGATTACCAGAAAGGTATTGAGCTGATTCGCCAGGCAATTCCAGAGCTTATGATAGATGATGTTCAGTTTGTAATGCTTGGTTCAGGGAATCCTATTTACGAAGATTGGATGAGAGCAACAGAGTCAATTTATAAAGATAAATTCCGTGGTTGGGTTGGATTTAATGTTCCCGTATCTCATAGAATAACTGCAGGCTGTGATATACTGTTAATGCCATCAACATTCGAGCCATGCGGACTAAATCAGTTATATGCAATGAGATATGGAACTATACCGGTGGTTCATGAAACTGGGGGACTAAGAGATACAGTTCAAAATTTTAATCCATTTCCTGTAGGAACCAGTGCCGAAGGATGCAATGCTGAAGGCACAGGGTGGACGTTTACTCCGCTATCAAAGGAGAGCATGCTAGTGGCTCTAAGATACGCCATTCAAACATATAACGAACACAAGTCTTCATGGGAGGGATTAATGAAAAGAGGTATGACGAGAGATTACACGTGGGAAAAAGCCGCCACTCAATACGAGCAAATCATCGAGTGGGCATTCATGGATCCACCCTATTGCTAA 1977 0.434 MESLEIPRLLLHHHHPRASSSPSRPLSNSRFLPQLCFPSNLKKATKNATLRSVSGDTDGGPPASPDGPVSFEDDEIQQRDEDRALLLSKEIDDFGSLVGFRLSTTDSGKTTTTDTHRGELRSDEVEEPGDTNVGEDKAEIRVSHNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYQHGTAADKKFSSAVDLDRNINVFCFGAAQEVGFYHEYREGVDWVFVDHPSFHRPGNPYGDKIGTFTDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLAAKYRPYGVYKDARSILVIHNIAHQGVEPAITYSNLGLPQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTNEGGFGLHEILRDRKSILSGITNGIDVTEWDPSTDEHLASNYSAEDISGKVKCKVALQKELGLPVRPDCPMIGFVGRLDYQKGIELIRQAIPELMIDDVQFVMLGSGNPIYEDWMRATESIYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFPVGTSAEGCNAEGTGWTFTPLSKESMLVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEKAATQYEQIIEWAFMDPPYC 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02814 658 Gene3D Glycogen Phosphorylase B; 418 634 - -
Vivi3g02814 658 Pfam Starch synthase catalytic domain 145 403 IPR013534 -
Vivi3g02814 658 CDD GT5_Glycogen_synthase_DULL1-like 145 650 - -
Vivi3g02814 658 MobiDBLite consensus disorder prediction 51 73 - -
Vivi3g02814 658 MobiDBLite consensus disorder prediction 112 132 - -
Vivi3g02814 658 Pfam Glycosyl transferases group 1 461 616 IPR001296 GO:0016757
Vivi3g02814 658 FunFam Starch synthase, chloroplastic/amyloplastic 145 430 - -
Vivi3g02814 658 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 143 652 - -
Vivi3g02814 658 NCBIfam glycogen/starch synthase, ADP-glucose type 145 648 IPR011835 GO:0004373
Vivi3g02814 658 Hamap Glycogen synthase [glgA]. 144 651 IPR011835 GO:0004373
Vivi3g02814 658 Gene3D Glycogen Phosphorylase B; 164 647 - -
Vivi3g02814 658 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 136 657 - -
Vivi3g02814 658 MobiDBLite consensus disorder prediction 102 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02814 Vivi-Chr3 47085494 47090740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02814 105 648 Glycosyltransferase AT3G01180 47.122 3.41e-165 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02814 K00703 - gmx:100807354 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02814 3 47085494 47090740 Vivi3g02814 3 47085494 47090740 ECH