Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02787 ATGGCAAACATTTCAATTCCACTCCCACGAACCGGTTTGTTGTCCACACGCAACTGCTCAACCAAACGCCCATCCTTCGCCACTTCAGCTCCACCTTTCAGAATTACTTGCTCTGTTGTAAGAGAAGGTGACTTAGATGGATCTGAAAATAAAGCAAGGTTATTTAGTTTTAATACAATCAAGGGCGTTGCTTGTGGTATTCTTGCAGCTTACACTGTTACTTCTGCTTCATTTCCCGTTATTGCTGCTACTCAGAGGTTGCCCCCGTTGTCAACTGAGCCCAATCGCTGCGAGCGGGCATTTGTTGGCAACACAATTGGTCAGGCAAATGGTGTGTATGACAAACCATTAGATCTTCGAAAATGTGACTTTACAAATGAAAAATCCAACCTAAAGGGGAAGACACTGTCTGCAGCACTAATGTCTGATGCCAAGTTCGATGGCGCTGACATGACAGAAGTTATAATGTCGAAAGCTTATGCTGTCGGGGGCAGCTTCAAAGGTGTGGACTTCTCAAACGCAGTATTGGACCGAGTTAATTTCGGGAAAGCTGATCTCCAAGGAGCTGTATTTAGGAACACGGTTTTGTCGGGGTCGACCTTTGACGAAGCTAAACTAGAAGGTGCTGTTTTTGAGGATACTATCATTGGTTACATTGATCTCCAGAAGATATGCAGAAATACGAGTATCGGCGAGGAAGGAAGAGCCGAGCTAGGATGTCGATGA 726 0.4504 MANISIPLPRTGLLSTRNCSTKRPSFATSAPPFRITCSVVREGDLDGSENKARLFSFNTIKGVACGILAAYTVTSASFPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRKCDFTNEKSNLKGKTLSAALMSDAKFDGADMTEVIMSKAYAVGGSFKGVDFSNAVLDRVNFGKADLQGAVFRNTVLSGSTFDEAKLEGAVFEDTIIGYIDLQKICRNTSIGEEGRAELGCR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02787 241 Pfam Pentapeptide repeats (8 copies) 128 157 IPR001646 -
Vivi3g02787 241 Pfam Pentapeptide repeats (8 copies) 176 213 IPR001646 -
Vivi3g02787 241 SUPERFAMILY Pentapeptide repeat-like 117 222 - -
Vivi3g02787 241 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 6 241 IPR044195 -
Vivi3g02787 241 Gene3D - 115 240 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02787 - - vun:114162574 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02787 3 46726515 46728810 Vivi3g02787 3 46726515 46728810 ECH