Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02730 ATGCGTTTTGATATGCCTGGTGTTTCTAAGGAGGATGTGAAGGTATCAGTTGAAGATGATGTTCTTGTCATAAGAAGTGACCATAAAGAGGAAAGTGGTGGAGAAGATTCATGGTCGAGAAAGAGTTATAGTTCTTATGATACAAAGCTCAAGCTTCCTGATAACTGCGAGAAAGATAAGGTTAAGGCTGAGTTGAAAGATGGTGTGCTTTATATTACTATTCCTAAGACTAAAGTTGAACGCAAGGTTATTGATGTTCAAGTTCAGCGATGA 273 0.381 MRFDMPGVSKEDVKVSVEDDVLVIRSDHKEESGGEDSWSRKSYSSYDTKLKLPDNCEKDKVKAELKDGVLYITIPKTKVERKVIDVQVQR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02730 90 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 1 89 IPR002068 -
Vivi3g02730 90 Pfam Hsp20/alpha crystallin family 1 89 IPR002068 -
Vivi3g02730 90 CDD ACD_sHsps-like 2 76 - -
Vivi3g02730 90 Gene3D - 1 90 IPR008978 -
Vivi3g02730 90 SUPERFAMILY HSP20-like chaperones 2 86 IPR008978 -
Vivi3g02730 90 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 89 IPR044587 GO:0009408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02730 Vivi-Chr3 45810766 45811141 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02730 K13993 - vvo:131655605 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02730 3 45810766 45811141 Vivi3g02730 3 45810766 45811141 ECH