Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02698 ATGGCAATGGCGACTCACTTCAACTTCCAAACTAACTTTCTCCCATCTTCCCGTCCTCCCACTCGCCGCCTTTCTGTACTCGCTCTATCTCCTCGAATCTCCTCCAAGACCAAGATACTACCCTCCTCAACATTCTTGAAAGGAGAAAGCACAAAGCAATTGCTCAAATTCAACTATGCTGCAACAACTACAACAACTAAACACCGCGTCATTCGCATGTCGTGGGACGGTCCACTCTCTTCCGTCAAATTAATCATCCAGGGTAAAAACATGGAGCTTAGTGATGCGGTGAAGCAGCACGTGGAGGACAAAGTTGGGAGAGCAGTTCAGAAGCACAGCTACATTGTTAGGGAAGTTGATGTCAGGCTATCTACTCGCGGAGGAGGAGAATTTGGCCGAGGCCCCAGAACGCGCAGATGTGAGGTGACTTTATTTACTAAGAGGCATGGGGTTGTGCGGGCCGAGGAGCACGCTGAAACTACCTATGGGAGTATAGATTTGGTGTCCTCGATCATTCAGAGAAAGTTGAGAAAGATCAAGGAAAAAGAAACCGATCATGGTCGCCACATGAAGGGATCCGATAGGTTGAAAGTCAGGGAGCCCGTATTGCCATTACCGTCAGATGATGAAGAGGATGAAATTGAAATTTCGCCACAGAAGGAGGAGGAAGAGCAACTTATTGAAGAGGTTGTAAGAACAAAATACTTTGACATGCCTCCCTTAACCGTGTTTGAAGCAATTGACCAGTTGGAAAATGTTCATCATGACTTCTATGCTTTTCGAAATGAAGAAACTGGGGAGATTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGGCTCATTATACCCAAAGGAGACGGCGAAGCAGATAAATTGGAGCCTATAGTGCTTGAACCAGCTAAAGAACCCTCTGTGCAAGAATGA 927 0.4563 MAMATHFNFQTNFLPSSRPPTRRLSVLALSPRISSKTKILPSSTFLKGESTKQLLKFNYAATTTTTKHRVIRMSWDGPLSSVKLIIQGKNMELSDAVKQHVEDKVGRAVQKHSYIVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGSDRLKVREPVLPLPSDDEEDEIEISPQKEEEEQLIEEVVRTKYFDMPPLTVFEAIDQLENVHHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGDGEADKLEPIVLEPAKEPSVQE 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02698 308 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 85 182 IPR003489 GO:0044238
Vivi3g02698 308 NCBIfam ribosome-associated translation inhibitor RaiA 83 187 IPR003489 GO:0044238
Vivi3g02698 308 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 83 189 IPR036567 -
Vivi3g02698 308 CDD RaiA 83 182 IPR003489 GO:0044238
Vivi3g02698 308 Hamap Ribosome hibernation promoting factor [hpf]. 82 285 IPR034694 -
Vivi3g02698 308 Gene3D - 83 187 IPR036567 -
Vivi3g02698 308 Gene3D - 240 289 IPR038416 -
Vivi3g02698 308 PANTHER 30S RIBOSOMAL PROTEIN 70 294 - -
Vivi3g02698 308 FunFam ribosome-binding factor PSRP1, chloroplastic 240 291 - -
Vivi3g02698 308 FunFam Ribosome-binding factor PSRP1, chloroplastic 84 187 - -
Vivi3g02698 308 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 228 281 IPR032528 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02698 - - psat:127081225 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02698 3 45094271 45096424 Vivi3g02698 3 45094271 45096424 ECH