Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02691 ATGTCTGTAATCACAATACAATCTCCAAAACATTGTGCAACAAAACAAGTCCTCAAAATAGAAAGAAACTACAAGAAAATCTTCTTTGCTTTCTCAACATTTTTCACCACAATCCTCTTACTCATACTCCTCATCTATTTCATCCTCAAACCCTCCAAACCTCAATTCTCCCTCCAAGAACTTGACATCTATCAACTCAACCTCACAGGACCAATCCTCAACTCATCAATCCAACTGACCCTCCTCTCCAAAAATCCAAACCAGAAAGTTAGCATCTACTACGACGAGTTTCAAGTTTATGCAACTTACAAGAATCAACAGATAACCAGTGATTCATATGTGCCACCCTTTTACCAAGGACAGCAAGAGAGTAATCTTCTGTCATCTTCTTTGGTAGGAAATGGTTTACCTGTTGCTCCTTCCATTGGTTATCAAATGGGCCATGATCAAGCTTCTGGAAGATTGGGTTTGAACCTTAAAGTTAATGGAAAGCTTCGTTGGAAAATTGGAACATGGGTTTCTGGTCGTTACAGGTTTAATGTTAACTGTGTTTCTGTTGTGGCGTTTGGAATTGGAACCTCCATGAATGTGGCTCCTATGACTTCTCAGTGTTCTACCATAATATAA 627 0.3907 MSVITIQSPKHCATKQVLKIERNYKKIFFAFSTFFTTILLLILLIYFILKPSKPQFSLQELDIYQLNLTGPILNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKNQQITSDSYVPPFYQGQQESNLLSSSLVGNGLPVAPSIGYQMGHDQASGRLGLNLKVNGKLRWKIGTWVSGRYRFNVNCVSVVAFGIGTSMNVAPMTSQCSTII 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02691 208 PANTHER OS05G0367900 PROTEIN 24 205 IPR044839 GO:0098542
Vivi3g02691 208 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02691 Vivi-Chr3 45013033 45013932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02691 35 183 EF-hand Containing Proteins AT5G21130 20.382 8.46e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02691 - - gmx:100783857 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02691 3 45013033 45013932 Vivi3g02691 3 45013033 45013932 ECH