Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02679 ATGTCTCCAGGTCCCATTGTTGACGCAACCGCCGAAGGAATCACCGACCAACAACTTCCTTCCGTCGACGAAACAACCCTCAAGAAGGCACCTCTTCCACAGGAAGAAAACGACGCTCCTATCGTCGAGGATGACGACGACGACGATGAGAAAGACGAATCTGACGACGAAGAAGATGACGCCGCTCAAGGTGGTACTGAAGGTTCGAAGCAGAGTAGAAGTGAGAAGAAGAGTCGCAAAGCAATGTTGAAGCTCGGACTAAAACCAATTGATGGTGTTAGTAGGGTAACAATCAAGAGAACAAAAAATATAATGTTTTTCATCTCAAAACCTGATGTCTTCAAGAGTCCAAATTCTGAGACCTATGTTATATTTGGGGAGGCAAAAATAGAGGATCTGAGCTCTCAATTGCAGACACAAGCTGCTCAACAGTTCAGGATGCCTGATATGGGATCTATTATGGCAAAACCAGAACAGGGTGCTATAGCTGATGGAGCACAGCCTGAAGAGGAAGAGGAGGTTGATGAAACTGGCGTGGAAGCCCACGATATTGATCTGGTCATGACACAGGCAGGAGTGTCAAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACAATGGAGACATTGTCGGTGCCATCATGGAGCTAACTAATTAA 657 0.4658 MSPGPIVDATAEGITDQQLPSVDETTLKKAPLPQEENDAPIVEDDDDDDEKDESDDEEDDAAQGGTEGSKQSRSEKKSRKAMLKLGLKPIDGVSRVTIKRTKNIMFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSIMAKPEQGAIADGAQPEEEEEVDETGVEAHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02679 218 Gene3D - 81 134 IPR038187 -
Vivi3g02679 218 MobiDBLite consensus disorder prediction 38 62 - -
Vivi3g02679 218 Gene3D - 179 216 - -
Vivi3g02679 218 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 34 217 IPR016641 GO:0005854
Vivi3g02679 218 ProSiteProfiles NAC A/B domain profile. 72 137 IPR002715 -
Vivi3g02679 218 CDD UBA_NAC_euk 183 217 - -
Vivi3g02679 218 SMART NAC_2 75 131 IPR002715 -
Vivi3g02679 218 FunFam Putative nascent polypeptide-associated complex subunit alpha 179 216 - -
Vivi3g02679 218 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 82 134 - -
Vivi3g02679 218 MobiDBLite consensus disorder prediction 1 80 - -
Vivi3g02679 218 Pfam NAC domain 75 130 IPR002715 -
Vivi3g02679 218 CDD NAC_NACA 86 133 - -
Vivi3g02679 218 Pfam HYPK UBA domain 178 217 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02679 Vivi-Chr3 44772181 44773903 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02679 K03626 - gmx:100780632 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02679 3 44772181 44773903 Vivi3g02679 3 44772181 44773903 ECH