Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02673 ATGGCAGCCATTCATGTTCTTGTTGTGTTTCTGTCGTGCATTTCAACTGTGGTGAGATGTGAGGGTGATGAAGATGACGCTTATGCTCAAGAGATTCTAAATTCAGCCCAAAAGGAAAAGGATTGGTTGGTTTCAGTGAGAAGGAAGATTCATCAACACCCAGAATTGGCTTTCCAAGAACACAACACAAGTGCTCTTATCCGCAGTGAACTTGACAAACTTGGCATACCTTATACATACCCAGTAGCCAAAACTGGTGTAGTTGCACAAATTGGTTCTGGTTCTTCTCCGATCATCGCTATTCGTGCTGATATAGATGCACTCCCCTTGCAGGAGCTTGTTGAGTGGGAGTACAAGAGCAAGATTGATGGCAGAATGCATGCTTGTGGACATGACGCTCATGCCACTATGCTACTTGGGGCTGCAAAGTTGCTTAATCAGCGCAGAGATAAGCTTAAGGGAACTGTGAGGCTTATTTTCCAACCTGCTGAAGAGGGAGCTAAAGGTGCCTCACAAATGATAAAAGAAGGAGTTCTTCAAGACGTCGAAGCAATTTTTGCTCTTCATATTGATGCTATGACATCTACTGGAGCCATAGCATCGATTGCAGGACCTTTTACAGCTGCTGGATGTATCTTTGAGGCAAAAATTGTAGGAGTAGGTGGTCACGCTGCACTCCCGCACATGACTGTAGATCCAGTGCTGGCTACATCATTTGCAATATTGGCCCTGCAACAGCTTGTCTCAAGGGAAATTGATCCTCTTCACAGTCAAGTGCTGTCTATTACGTATGTCAAAGGAGAGAACGCGTTAAACGTGATCCCATCCTATGTGAAGTTTGGAGGTACTCTAAGGAGCCAGACAACTGAAAGCATGTACCACTTCAGACAGAGATTAAAAGAGGTTATTGAAGGACAAGCAAGTGTACATCGATGTAAAGCATATGTTGCTTTCATGGAAAAAGACCACACGCCATATCCTGCTGTTGTCAACGACAAAGACTTACATCGACATGTCGATAGAGTTGGCCGACTTCTGCTTGGTCCAGACAATGTCCATGAAGCAAAGAAGGTGATGGCAGGTGAAGATTTTGCGTTTTATCAAGAAGTGATTCCTGGAACATTGTTTTCCATTGGAATCAGAAATGAGAAAGTAGGATCAGTTCACTCTCCACACTCTCCATTTTTCTTTCTCGATGAGGAAGTTCTTTCAATTGGAGCAGCTCTGCACACCGCTGTCGCTGAGTTGTATTTAAGTGAGCATAGTATTTAA 1272 0.4379 MAAIHVLVVFLSCISTVVRCEGDEDDAYAQEILNSAQKEKDWLVSVRRKIHQHPELAFQEHNTSALIRSELDKLGIPYTYPVAKTGVVAQIGSGSSPIIAIRADIDALPLQELVEWEYKSKIDGRMHACGHDAHATMLLGAAKLLNQRRDKLKGTVRLIFQPAEEGAKGASQMIKEGVLQDVEAIFALHIDAMTSTGAIASIAGPFTAAGCIFEAKIVGVGGHAALPHMTVDPVLATSFAILALQQLVSREIDPLHSQVLSITYVKGENALNVIPSYVKFGGTLRSQTTESMYHFRQRLKEVIEGQASVHRCKAYVAFMEKDHTPYPAVVNDKDLHRHVDRVGRLLLGPDNVHEAKKVMAGEDFAFYQEVIPGTLFSIGIRNEKVGSVHSPHSPFFFLDEEVLSIGAALHTAVAELYLSEHSI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02673 423 PIRSF Amidohydrol_AmhX 28 422 IPR017439 GO:0016787
Vivi3g02673 423 Pfam Peptidase family M20/M25/M40 100 413 IPR002933 GO:0016787
Vivi3g02673 423 Gene3D Zn peptidases 44 403 - -
Vivi3g02673 423 CDD M20_IAA_Hyd 43 418 IPR044757 GO:0009850|GO:0016787
Vivi3g02673 423 SUPERFAMILY Zn-dependent exopeptidases 30 419 - -
Vivi3g02673 423 PANTHER PEPTIDASE M20 FAMILY MEMBER 19 422 IPR017439 GO:0016787
Vivi3g02673 423 SUPERFAMILY Bacterial exopeptidase dimerisation domain 208 323 IPR036264 -
Vivi3g02673 423 Gene3D - 208 326 - -
Vivi3g02673 423 NCBIfam amidohydrolase 43 406 IPR017439 GO:0016787
Vivi3g02673 423 FunFam N-acetyldiaminopimelate deacetylase 208 326 - -
Vivi3g02673 423 Pfam Peptidase dimerisation domain 213 306 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02673 Vivi-Chr3 44745292 44748984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02673 K14664 - gmx:100777587 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02673 3 44745292 44748984 Vivi3g02673 3 44745292 44748984 ECH