Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02552 ATGCTCAACTCCCTCCGTTTTCAAGCTTCAAACCACCCACCCATTTCTCCAACCTCCACCAAACCTTTCACCATCAACAACACTCTCTCACAACAACGCAACCTCTCCTTCACAAAACCCATCGCACTCCCCCAACTCCTCACTTCTTTCACCACCCACTCACTTCAACCGCCACATTACATCTCCACCGTTGGATCCTCATCCCCCACCCCCTCCCACTGGAACCTCACCCAACGCCACCTCACTCTCCTCCAAGTCTCCGCCGTCGTGTCAGCGATATTTACAACGTGGCTCTTTGGTTCTGCAATTCCCTCGCTTCTGGCTTTCAAGAAGGCAGCAGAATCACTTGAGAAGGTTATGGATACAGCGAGAGAAGAACTTCCTGATACAATGGCTGCGGTTAAATTATCCGCCGCAGAAGTCAGTGACTTAACCACCGAACTCAGTGATCTTGGACAAGAGATTACTCAAGGTGTTAGAAGCTCCACTCGCGTGGTTCGCTCGGTGGAGCAGGGGCTTCGCGGTTTAACCACTATGCCTTCTTCTTCAGGGAATGGAATACAGCTCCAATACTGCGCCTGA 582 0.5137 MLNSLRFQASNHPPISPTSTKPFTINNTLSQQRNLSFTKPIALPQLLTSFTTHSLQPPHYISTVGSSSPTPSHWNLTQRHLTLLQVSAVVSAIFTTWLFGSAIPSLLAFKKAAESLEKVMDTAREELPDTMAAVKLSAAEVSDLTTELSDLGQEITQGVRSSTRVVRSVEQGLRGLTTMPSSSGNGIQLQYCA 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02552 193 Coils Coil 106 126 - -
Vivi3g02552 193 PANTHER CHITINASE-LIKE PROTEIN 32 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02552 Vivi-Chr3 42979803 42981359 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02552 - - tpra:123915785 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02552 3 42979803 42981359 Vivi3g02552 3 42979803 42981359 ECH