Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02516 ATGGATAGATACCAGAGGGTGGAGAAGCCGAAAGCAGACACTCCAATCAACGAAAATGAGATCCGCATTACTACTCAAGGAAGGATGAGGAACTATATCACATATGCCACCACTCTCTTTCAAGAGAAAGGATCAGATGAAATTGTTGTCAAAGCAATGGGACGGGCGATAAATAAGACTGTAATGATTACTGAGCTAATAAAGAGAAGGATTGTTGGTCTTCATCAGAACACTCAAATTGGATCAACTGATATAACCGACACATGGGAACCACTAGAAGAAGGCCTTCTTCCTTTGGAAACTACCCGTCATGTTTCAATGATCACAATCACCTTGTCAAAGAAAGAGCTGGATACATCCTCTATAGGATATCAACCTCCTCTACCGGCTGATCAAGTAAAACCTTTAAATGAATATGAAGACGAAGGAGAAGGCTCACCAAGGATGCGAGGAAGGGGGCGAGGTCGTGGAAGGGGCAGGGGTAGAGGTAGAGGCAGAGGAATGTACAACGGGGGTATGGAATATGGAGATGGTTGGGATGGTGGCCGTGGCTATGGTGGTGGCAGAGGGCGTGGCCGTGCATGGGGCCGTGCTTTCCGGGGACGAGGACGAGGCTATGGTGCCCAGCCTGTCGGGTATTACGACAATGGTGAATATGATGCACCACCTGCCCCACGTGGCCGAGGTCGCGGAAGGGGATGGGGTGGTGGTCGTGGTCGTGATGCAGGCCATGGTGCAGCTGCCTGA 747 0.5007 MDRYQRVEKPKADTPINENEIRITTQGRMRNYITYATTLFQEKGSDEIVVKAMGRAINKTVMITELIKRRIVGLHQNTQIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTSSIGYQPPLPADQVKPLNEYEDEGEGSPRMRGRGRGRGRGRGRGRGRGMYNGGMEYGDGWDGGRGYGGGRGRGRAWGRAFRGRGRGYGAQPVGYYDNGEYDAPPAPRGRGRGRGWGGGRGRDAGHGAAA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02516 248 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
Vivi3g02516 248 MobiDBLite consensus disorder prediction 215 248 - -
Vivi3g02516 248 MobiDBLite consensus disorder prediction 124 167 - -
Vivi3g02516 248 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Vivi3g02516 248 PANTHER RIBONUCLEASE P SUBUNIT P25 1 240 - -
Vivi3g02516 248 Pfam Alba 19 83 IPR002775 GO:0003676
Vivi3g02516 248 Gene3D - 14 118 IPR036882 GO:0003676
Vivi3g02516 248 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02516 Vivi-Chr3 42170225 42173940 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02516 - - cam:101498857 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02516 3 42170225 42173940 Vivi3g02516 3 42170225 42173940 ECH