Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02513 ATGACAATGTTACCAATTTTGCACCTCATCCTCTTCCCATTAATCATTTACCACACCACCTCCTTTGCCACCGCGGTTGATCCCACACAAGGGTTCACCCAACTTCCATTAGGTAACTCAAACTTCCAAATTCAAAAGCCTTACGATGTCTCAGTAAACGAACGTTACAGCTTCTCAAATGGAGTGCACAAATTCTGGATATACCCTACAGACAAGCCTTTCATGTCTGGCAGTAACACACAACCACGAACAGAGATTCGAATCACCGGATATGATTATACTTCTGGTGTATGGCAATTTGAAGGATCCGGTTATATTCCAAGTGGCACAAGCGGTGTTTGTGTTATGCAAGTGTTCGGTGGAAGTTCTACCGCCACAACATCTCAGCTTAGAGTCTATGATGGTTCGTTAACTTATTATAGATCTCCTGTTTTGTCTCCAAATATCTATAATAGGTGGTTTAAAGTGAATGCTATTCATGATGTTGGTGCTAACAATGTTAAGATTTATATTGATGGAAATCTTAAGTATAATGGAGATGGTCGTGGAGCTGGTACTCACTATTTTAAGATCGGGGTTTATGTACAGAATGATCCTTCCAGTTACATGGAGTCTCGTTGGAGAGATATGAAAGTTTTTAAGAAATAG 648 0.3997 MTMLPILHLILFPLIIYHTTSFATAVDPTQGFTQLPLGNSNFQIQKPYDVSVNERYSFSNGVHKFWIYPTDKPFMSGSNTQPRTEIRITGYDYTSGVWQFEGSGYIPSGTSGVCVMQVFGGSSTATTSQLRVYDGSLTYYRSPVLSPNIYNRWFKVNAIHDVGANNVKIYIDGNLKYNGDGRGAGTHYFKIGVYVQNDPSSYMESRWRDMKVFKK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02513 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 18 215 - -
Vivi3g02513 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 204 IPR013320 -
Vivi3g02513 215 Gene3D - 33 214 - -
Vivi3g02513 215 Pfam Alginate lyase 40 213 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02513 Vivi-Chr3 42113037 42114019 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02513 - - pcin:129309933 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02513 3 42113037 42114019 Vivi3g02513 3 42113037 42114019 ECH