Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02495 ATGCCGCCGGCGAAGAAAGGGAAAACAAAGGCTGGATCAAAGGAAACGACTCCTTTAGAAAAACCTAACAATTTTCCTTCGTGTATTCGGTGCATGCCTCCTTCATCCGTTGCTATAACCATCCATGCTAAACCAGGTTCCAAGTCCGCCTCCATAACAGATGTGAGCGATGAAGCTGTTGGTGTGCAAATTGATGCACCGGCGAGGGATGGTGAAGCAAATGCTGCTCTTCTTGATTACATCAGCTCTGTTTTAGGTGTAAAACGAAGACAAGTATCTTTAGGTACGGGTTCTAAGTCAAGAGATAAAACAGTCATTGTGGAAGATGTAACTCAGCAATATGTTTTTGATGCTTTGGATAGAGTCTCAAAACAGTAG 378 0.4339 MPPAKKGKTKAGSKETTPLEKPNNFPSCIRCMPPSSVAITIHAKPGSKSASITDVSDEAVGVQIDAPARDGEANAALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDRVSKQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02495 125 MobiDBLite consensus disorder prediction 1 26 - -
Vivi3g02495 125 SMART DUF167_2 33 109 IPR003746 -
Vivi3g02495 125 NCBIfam DUF167 family protein 38 106 IPR003746 -
Vivi3g02495 125 PANTHER OS04G0686300 PROTEIN 1 124 - -
Vivi3g02495 125 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Vivi3g02495 125 SUPERFAMILY YggU-like 27 113 IPR036591 -
Vivi3g02495 125 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Vivi3g02495 125 Gene3D - 29 123 IPR036591 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02495 K09131 - gmx:100527290 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02495 3 41742441 41743816 Vivi3g02495 3 41742441 41743816 ECH