Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02471 ATGGCTTCTAAGATCAACTTCTCACATTTTCTCCTCCTCCTCCTCTTCTTAGCACACTATACATTTGTGAATGGAGACACCACTTTAATCAAAAGCACTTGCAAGAACACCAAGTACTACAACCTATGTTTCTCTTCTCTCAAATCCAACCCTACCAGTCCAAACGCAGACACAAAGGGCTTAGCTTTGATCATGCTTGGAATTGGAATGACAAATGCCACTTCCACTTCTTCATACTTGTCTTCCAAATCTCTCACACCTACCTACAACACTACCTTACAAAGAGTCCTCAAAGAGTGTGCAGATAAGTACTCTTATGCTGGTGATTCTCTCCAAGCCTCAGTGCAAGATTTGGCTGATGAAGAATATGATTATGCTTACATACACATCACTGCAGCTAAAGATTATCCAAATGCTTGTCATAATGCATTCAAAAGGGCTCCTGATTTGGTTTACCCTTCTGAGCTTGCTAGGAGAGAAAAAGGTTTGAAGCATATATGTGATGTGGCTATGGGGATCATTGATAATCTCATTAATTTGTAG 543 0.4015 MASKINFSHFLLLLLFLAHYTFVNGDTTLIKSTCKNTKYYNLCFSSLKSNPTSPNADTKGLALIMLGIGMTNATSTSSYLSSKSLTPTYNTTLQRVLKECADKYSYAGDSLQASVQDLADEEYDYAYIHITAAKDYPNACHNAFKRAPDLVYPSELARREKGLKHICDVAMGIIDNLINL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02471 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 177 IPR035513 -
Vivi3g02471 180 NCBIfam pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Vivi3g02471 180 Pfam Plant invertase/pectin methylesterase inhibitor 29 172 IPR006501 GO:0004857
Vivi3g02471 180 CDD PMEI_like 34 176 - -
Vivi3g02471 180 FunFam Cell wall / vacuolar inhibitor of fructosidase 2 25 177 - -
Vivi3g02471 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 178 - -
Vivi3g02471 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 178 IPR035513 -
Vivi3g02471 180 SMART PMEI_2 25 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02471 Vivi-Chr3 41371020 41373539 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02471 - - gmx:100306461 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02471 3 41371020 41373539 Vivi3g02471 3 41371020 41373539 ECH