Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02466 ATGCAGACCCGGGTTTATCATCAGTATCGCAGTGTGAATAATAAAGAATCGATTCCTAGAGTATCGATGGTAAACAGAAGAAGCCTAATGGCTAGAATTCACACCAGAAAACTATCTCTCAGAATCATCACTTTCTACACCATTTTCATATTCGCTTTCTTCATCTCCATCTTCTTCATCTACGTAAGAACCTTCATAGTTGACGAAGATCAATCGCATGATCCATTTTCTCATCAATCTCGATCTCACAAGGTGCCAGATTCACCTAAGAACGTTTACGACGAACAGCTCTGGGATTCTCCTCATAGTATAGGCTTTCACCCCTGCGTCAAGCCAACTGCTAAGTACAAAGGTGTCCAACAATTTGATCGCTATATGTCTGTTAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATAGCAGACATGGTGGCTGTGGCACATATAATGAATGCAACTTTGGTCATCCCTCAATTGGATAAACGTTCATTCTGGCAAGACTCGAGTGTATTCTCAGACATATTCGATGAGCTTCATTTCATTGAATCCCTGAAAGGAGATATCAGGATTGTTCAGGAACTTCCTAAGAGTTTGGAAGCAGCCCCCCGGGCTAGGAAACACTTCACTTCCTGGGCTGGAGTTGGTTACTATGAAGAGATGACAAAGTTATGGAATGAGTACCAGGTGCTGAGGACCATATTAGATTTTTCCGCTGACATTTGTGTTACTACTACGACCCCACTTAGTGGGATAAGACTTGGTTGTTGTTGTTGTTATATTGCTACTACGTGCTTCTTTCTAGGCATGTGCAAACTTAATATCCATTCTCAATGGAAGGGCTTCGTGATACATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTCTAGACATTCAGAGGTTGAGATGTCGTGCGATGTATCATGCACTTCGATTTTCTCCTCCTATTGAGAATCTAGGAAAGAGGTTGGTGGATCGGCTGAGATCACGAGGGGAAAGATATATTGCTCTCCATCTGAGATATGAGAAAGATATGTTGTCTTTTACTGGTTGTGCTTACGGTCTGACAGATGCAGAATCTGAAGAGCTGAGAATTTTAAGGGAGACTACAAATTATTGGAAAGTAAAAAAGATAAACTCAACAGAGCAGAGAATTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTTGGCATTTTCCTTCAAGCTCTTGGGTTTCCTCCATCAACACCAATATACATTGCTGCAGGGGAGATCTATGGTGGCAATACTCATCTATCAGAGCTCTCTTCCCGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAACTCCTGAAGAGCTGAAAGCTTTCAACAATCATGCATCTCAAAATGCTGCAATTGATTACATAATCTCTGTAGAGAGTGATGTATTTGTTCCATCGTATTCAGGAAATATGGCACGAGCTGTTGAGGGGCACCGCAGGTTCTTAGGTCACCGCAAGACAATTGACCCAGACAGGAAAGGACTAGTTGAAATTTTTGATAAGCTGGAAACTGGAAGGCTAGTAGAAGGAACGGCACTATCACATATGGTGCAGCGGATGCACAAAAACAGGCAAGGAGCTCCAAGGAAAAGACAAGGTCCATTGCCCGGAGTTAAGGGCCGGGCACGTTTCAGGACTGAAGAGTCCTTTTATGAAAATCCATACCCAGAGTGTATATGTGGTTCGAGAAGCAAACTGGAAAGAACGTAA 1746 0.4244 MQTRVYHQYRSVNNKESIPRVSMVNRRSLMARIHTRKLSLRIITFYTIFIFAFFISIFFIYVRTFIVDEDQSHDPFSHQSRSHKVPDSPKNVYDEQLWDSPHSIGFHPCVKPTAKYKGVQQFDRYMSVRSNGGLNQMRTGIADMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDIFDELHFIESLKGDIRIVQELPKSLEAAPRARKHFTSWAGVGYYEEMTKLWNEYQVLRTILDFSADICVTTTTPLSGIRLGCCCCYIATTCFFLGMCKLNIHSQWKGFVIHVAKSDSRLANNDLPLDIQRLRCRAMYHALRFSPPIENLGKRLVDRLRSRGERYIALHLRYEKDMLSFTGCAYGLTDAESEELRILRETTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLQALGFPPSTPIYIAAGEIYGGNTHLSELSSRFPNLIFKESLATPEELKAFNNHASQNAAIDYIISVESDVFVPSYSGNMARAVEGHRRFLGHRKTIDPDRKGLVEIFDKLETGRLVEGTALSHMVQRMHKNRQGAPRKRQGPLPGVKGRARFRTEESFYENPYPECICGSRSKLERT 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02466 581 MobiDBLite consensus disorder prediction 533 553 - -
Vivi3g02466 581 Pfam GDP-fucose protein O-fucosyltransferase 125 493 IPR019378 -
Vivi3g02466 581 PANTHER OS02G0726500 PROTEIN-RELATED 283 573 - -
Vivi3g02466 581 PIRSF UCP009360 3 263 IPR024709 -
Vivi3g02466 581 PIRSF UCP009360 277 576 IPR024709 -
Vivi3g02466 581 CDD O-FucT_plant 125 499 IPR024709 -
Vivi3g02466 581 FunFam O-fucosyltransferase 28 308 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02466 Vivi-Chr3 41351544 41357645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02466 95 572 Miscellaneous Gene Families AT1G22460 52.610 1.14e-176 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02466 - - vvo:131661124 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02466 3 41351544 41357645 Vivi3g02466 3 41351544 41357645 ECH