Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02386 ATGAAGCTGTGTTTCTTTTTCTGCTTCCTGTGTTTCGTTTCAGCTTCCTTCACGTTCAACTTCATCTATGCCGGTAACGTCACTTACGATGGTCGTTCACTCATTATTGACGGTCAACGGAAGCTTCTTATCTCTGCTTCCATTCATTACCCACGAAGCGTTCCTGCCATGTGGCCTGGTCTTGTTCAAACAGCCAAACAAGGTGGGGTTGATGTCATTGAGACCTATGTTTTTTGGAATGGTCATGAGCTTTCTCCAGGAAATTATTACTTTGGAGGACGGTTTGATCTTGTTAAGTTTGCAAAGATTGTGCACGACGCTGGAATGCCGTTGATTCTCCGGATCGGTCCATTTGTTGCTGCAGAATGGAATTTTGGTGGAGTACCAGTATGGCTGCATTATATTCCAGGCACTGTATTCAGGACTTACAATAAGCCTTTTATGTATCATATGGAGAAATTTACAACATACATAGTGAATCTTATGAAGCAAGAGAAGCTTTTTGCATCACAAGGGGGTCCCATAATCTTATCCCAGATAGAAAATGAATACGGATACTATGAAAACTATTATAAAGAGGATGGTAAAAAATATGCCTTATGGGCAGCAAAAATGGCTGTTTCACAAAATACAAGTGTCCCTTGGATAATGTGTCAGCAGTGGGATGCTCCAGATCCTGTGATTGATACTTGCAATTCATTCTACTGTGATCAGTTTACGCCTACTTCTCCAAACAGGCCTAAAATTTGGACTGAGAACTGGCCTGGATGGTTTAAAACTTTCGGAGGCAGAGATCCTCACAGGCCAGTAGAAGATGTTGCTTTTTCTGTTGCTCGGTTCTTCCAGAAAGGTGGAAGTGTACATAATTACTACATGTATCATGGAGGAACGAACTTTGGCCGTACAGCAGGTGGTCCATTCATTACTACAAGTTATGACTATGATGCCCCAATAGATGAGTATGGGTTGCCTAGACTTCCAAAATGGGGACATCTTAAGGATCTTCACAAAGCTATCAAGTTATGTGAGCATGTATTGCTTCATGGGAAATCGGTTAATACATCCCTTGGTCCTTCTGTGGAGGCTAGTGTCTATACTGACTCAACTGGAGCATGTGCTGCCTTCATTTCTAATGCCGATGATAAAAATGATAAGACAGTGGAATTTCGAAATGCATCGTATCACCTGCCAGCATGGTCAGTTAGCATTCTTCCTGATTGCAAGTATGTAGTGTTCAACACGGCAAAGGTTTCTTCCCCGACAAACGTAGTTGCAATGGTTCCAGAGAAGTTGCAGCAATCAGATAAAGGTCAAAAAACTTTTAAATGGGATGTGTTGAAGGAGAATCCAGGGATCTGGGGGAAGGCTGACTTTGTCAAAAATGGCTTTGTCGATCACATCAATACCACCAAAGATACCACTGATTACCTGTGGCATACAACAAGCATACTTATTGGTGAAAATGAAGAGTTCCTAAAGAAAGGAAGTGAACCAGTTCTCCTAATAGAATCCAAGGGTCATGCTCTCCATGCTTTTGTGAATAAGAAATATCAAGGCACTGCATATGGTAATGGTTCACACTCAGCATTCACTTTTAAGAATCCCATCTCTCTCAAGGCAGGGAAGAATGAAATTGCTATATTGAGCTTGACTGTTGGCTTACAGACAGCTGGACCATTTTACGACTTTGTTGGGGCGGGAGTAACAAGTGTAAAAATTAATGGACTTAACAACAGGACGATAGATTTGTCTTCTAATGCATGGACTTACAAGATTGGAGTCCAAGGAGAGCATCAAAAGTTACACCAGGTAGATGGGTTGAATAATACGAAATGGACATCTACTTCAGAACCACCAAAAGGCCAGGCACTGACATGGTACAAGGCTATTGTGGATGCTCCACCCGGGGATGAACCAGTTGGGTTGGATATGTTGTATATGGGAAAAGGTTTAGCCTGGTTAAACGGAGAAGAAATCGGAAGATATTGGCCTAGGTTAAGTGAATTTAAGAAGGAAGATTGTGTTCAAGAGTGTGACTACAGAGGGAAATTTAATCCTGATAAATGTGTTACTGGTTGTGGAGAACCTACCCAAAGATGGTATCATGTTCCACGATCTTGGTTCAAGCCATCTGGAAATGTTCTTGTGTTCTTTGAAGAGAAAGGTGGTGATCCAACAAAGATTACATTCGGGAGAAGGAAAGTAGTGTAG 2211 0.417 MKLCFFFCFLCFVSASFTFNFIYAGNVTYDGRSLIIDGQRKLLISASIHYPRSVPAMWPGLVQTAKQGGVDVIETYVFWNGHELSPGNYYFGGRFDLVKFAKIVHDAGMPLILRIGPFVAAEWNFGGVPVWLHYIPGTVFRTYNKPFMYHMEKFTTYIVNLMKQEKLFASQGGPIILSQIENEYGYYENYYKEDGKKYALWAAKMAVSQNTSVPWIMCQQWDAPDPVIDTCNSFYCDQFTPTSPNRPKIWTENWPGWFKTFGGRDPHRPVEDVAFSVARFFQKGGSVHNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLPRLPKWGHLKDLHKAIKLCEHVLLHGKSVNTSLGPSVEASVYTDSTGACAAFISNADDKNDKTVEFRNASYHLPAWSVSILPDCKYVVFNTAKVSSPTNVVAMVPEKLQQSDKGQKTFKWDVLKENPGIWGKADFVKNGFVDHINTTKDTTDYLWHTTSILIGENEEFLKKGSEPVLLIESKGHALHAFVNKKYQGTAYGNGSHSAFTFKNPISLKAGKNEIAILSLTVGLQTAGPFYDFVGAGVTSVKINGLNNRTIDLSSNAWTYKIGVQGEHQKLHQVDGLNNTKWTSTSEPPKGQALTWYKAIVDAPPGDEPVGLDMLYMGKGLAWLNGEEIGRYWPRLSEFKKEDCVQECDYRGKFNPDKCVTGCGEPTQRWYHVPRSWFKPSGNVLVFFEEKGGDPTKITFGRRKVV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02386 736 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Vivi3g02386 736 FunFam Beta-galactosidase 23 342 - -
Vivi3g02386 736 Gene3D - 569 678 - -
Vivi3g02386 736 FunFam Beta-galactosidase 291 419 - -
Vivi3g02386 736 Gene3D Glycosidases 24 342 - -
Vivi3g02386 736 FunFam Beta-galactosidase 583 674 - -
Vivi3g02386 736 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Vivi3g02386 736 Pfam Glycosyl hydrolases family 35 33 338 IPR031330 -
Vivi3g02386 736 SUPERFAMILY Galactose-binding domain-like 586 730 IPR008979 -
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 PANTHER BETA-GALACTOSIDASE RELATED 18 735 IPR001944 GO:0004553|GO:0005975
Vivi3g02386 736 SUPERFAMILY Galactose-binding domain-like 401 562 IPR008979 -
Vivi3g02386 736 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02386 Vivi-Chr3 40257824 40264071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02386 17 735 Glycoside Hydrolase AT5G63810 70.874 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02386 - - gmx:100815037 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02386 3 40257824 40264071 Vivi3g02386 3 40257824 40264071 ECH