Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02385 ATGGAAAAATGGATGTCTTTGGTGATGATACTTTTGTTGTTAATATGGTTGAAAACTATGAGACAAAGCTTTGGAGTTGAAGCTGCAGAAGAAGTGACATACGATGGAAGATCTCTTATCATCAATGGCCATAGAAATATTCTCTTCTCTGGTTCTATTCATTATCCCCGCAGCACCCCTCAGATGTGGGGAGACTTGATAGCGAAAGCAAAACAAGGAGGATTGGATGTTATACAAACGTATGTGTTTTGGAATCTTCATGAACCTCAACCCGGCAAGTATGATTTTAGCGGCAGATATGACTTGGTGAGATTCATAAAAGAAATTCAAAGTCAAGGCCTTTATGTTTGTCTAAGAATTGGACCCTTCATTGAAAGTGAATGGACATATGGAGGATTTCCATTTTGGCTACATGATGTCCCTGGCATTGTTTACCGAACAGACAATGAGCCATTTAAGTTCTACATGCAAAATTTTACAACAAAAATTGTCAACATGTTGAAAGAAGAAGGTTTATATGCTTCACAAGGAGGTCCAATTATATTGTCACAGATTGAGAATGAATATCAAAACGTCGAAAAAGCATTCGGTACGGCAGGATCGCGGTATGTTGAATGGGCCGCAAAAATGGCAGTAGGCCTTAATACCGGCGTACCGTGGGTAATGTGCAAGCAAACAGATGCTCCGGATCCTGTGATCAACACATGCAATGGTATGAAATGTGGAGAAACTTTTACAGGACCAAACTCTCCTAATAAGCCTGCAATGTGGACAGAGAACTGGACATCATTCTATCAAGTGTATGGTGGATTGCCATATATACGGTCTGCTCAAGACATTGCGTTTCATGTCACTCTTTTTATCGCAAGAAACGGAAGCTTTATCAATTACTATATGTATCACGGTGGAACAAACTTTGGGAGAACTGGCTCTGCTTATACTATAACAGGTTATTATGATCAAGCACCGCTCGATGAATATGGTTTGTTCAGACAACCAAAGTATGGACATCTCAAGGAGTTGCATGCAGCAATCAAGTCTTGTTCAACCACTTTATTACAAGGAGTGCAGAGGAATTTCTCCTTAGGTGAATTACAGGAAGGTTATGTTTTTGAAGACAAAAATGGAGGATGTGTTGCATTCCTTATAAACAATGATATACGGAACAATGTTACTGTCCAATTCCACAATAGTTCATATGACTTGCTCCCCAAGTCAATAAGTATCTTACCAGATTGTCAAAATGTAGCTTTCAATACTGCAAATGTAACTACAACCAGCAACAGAAGGATCATAACTTCAAGACAAAACTTCAGCTCAGTTGATGAATGGCAACAATTTCAAGATGTGATTCCAAATTTCGATGACACTTCATTAAGATCAAACTCATTACTCGAGCAAATGAATACAACTAAAGACACTTCTGATTACCTTTGGTATACTCTTAGGTTTGAAAACAATTTATCTTGCAGTGCTCCAATACTTCTTGTTCATTCTGCTGCTCATGTTGCTCATGCTTTTGTGAACAACACATTCATTGGAGGTGTGCATGGAAACCATGATGTGAAGTCATTTACATTAGAGCTTCCGGTTATATTAGACAAAGGAACAAACAACATTTCTATTCTCAGCGTTATGGTTGGACTTCCGGATTCAGGCGCATTTCTAGAAAGAAGATTTGCTGGTTTAATGAACGTGGAACTTCAGTGCAGTGAAGAAGAGACTCTTAACTTGAACAATTCTACATGGGGATATCAGGTTGGATTACTTGGAGAACAATTAGAAGTATATGAAGAACAAAATAGCCGAGACGATAAATGGACTGAACTCGGAAATATCATGATTGATGAAACTACTCTCACTTGGTACAAGACAACATTTGAGACACCGAAAGGAGATGATCCTGTGGTGTTAGACCTTAGCTCAATGGGGAAAGGTGAGGTTTGGATAAATGGACAAAGCATTGGTCGCTATTGGATTTTGTTTCATAATTCCAAAGGCAATCCTTCACAATCATTGTATCATGTTCCTCGGTCTTTCCTTAAAGACAGTGAAAATAGTTTGGTTTTGTTTGAGGAAGGTGGTGGGAACCCTCTTGGTATATCATTGAATACTGTTTCAGTTACTGATTTACAAGATGTCTTTTCTAAGTTATCACTTCCCACTTTTACTTAA 2175 0.3848 MEKWMSLVMILLLLIWLKTMRQSFGVEAAEEVTYDGRSLIINGHRNILFSGSIHYPRSTPQMWGDLIAKAKQGGLDVIQTYVFWNLHEPQPGKYDFSGRYDLVRFIKEIQSQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMLKEEGLYASQGGPIILSQIENEYQNVEKAFGTAGSRYVEWAAKMAVGLNTGVPWVMCKQTDAPDPVINTCNGMKCGETFTGPNSPNKPAMWTENWTSFYQVYGGLPYIRSAQDIAFHVTLFIARNGSFINYYMYHGGTNFGRTGSAYTITGYYDQAPLDEYGLFRQPKYGHLKELHAAIKSCSTTLLQGVQRNFSLGELQEGYVFEDKNGGCVAFLINNDIRNNVTVQFHNSSYDLLPKSISILPDCQNVAFNTANVTTTSNRRIITSRQNFSSVDEWQQFQDVIPNFDDTSLRSNSLLEQMNTTKDTSDYLWYTLRFENNLSCSAPILLVHSAAHVAHAFVNNTFIGGVHGNHDVKSFTLELPVILDKGTNNISILSVMVGLPDSGAFLERRFAGLMNVELQCSEEETLNLNNSTWGYQVGLLGEQLEVYEEQNSRDDKWTELGNIMIDETTLTWYKTTFETPKGDDPVVLDLSSMGKGEVWINGQSIGRYWILFHNSKGNPSQSLYHVPRSFLKDSENSLVLFEEGGGNPLGISLNTVSVTDLQDVFSKLSLPTFT 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02385 724 Gene3D - 584 715 - -
Vivi3g02385 724 PANTHER BETA-GALACTOSIDASE RELATED 17 714 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 SUPERFAMILY Galactose-binding domain-like 582 711 IPR008979 -
Vivi3g02385 724 FunFam Beta-galactosidase 298 425 - -
Vivi3g02385 724 Pfam Beta-galactosidase jelly roll domain 616 689 IPR025300 -
Vivi3g02385 724 SUPERFAMILY Galactose-binding domain-like 407 563 IPR008979 -
Vivi3g02385 724 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Vivi3g02385 724 FunFam Beta-galactosidase 28 349 - -
Vivi3g02385 724 Pfam Beta-sandwich domain in beta galactosidase 352 423 IPR041392 -
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Vivi3g02385 724 Gene3D Glycosidases 28 349 - -
Vivi3g02385 724 Pfam Glycosyl hydrolases family 35 38 344 IPR031330 -
Vivi3g02385 724 SUPERFAMILY (Trans)glycosidases 31 348 IPR017853 -
Vivi3g02385 724 FunFam Beta-galactosidase 585 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02385 Vivi-Chr3 40229461 40235534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02385 1 709 Glycoside Hydrolase AT5G63800 63.893 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02385 - - gmx:100818637 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02385 3 40229461 40235534 Vivi3g02385 3 40229461 40235534 ECH