Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02336 ATGCTAAGCAAAAAACAAGTTTATGCAAATCCAGATTCTCATCTTCCCCCCATGAGTTCCTTTCGCAACACACAAAAAGACGATGAACCCGGTTCATCAACCAAGAACCAAATGGGACCAAGCTTCCGCTCCCTCTCCAGCTGCAACCGAACCGGCCGAACCCCCTCGTCAAGCCGCGCGGTTCAACGATCCGCCTCCGCTAGATTGGCTCGTAAAAACTCCTCACGTGAGGTCATGCTTAACGATATCGTCGGTGACGGAATCTCCGGTATCTTGTATAAGTGGGTAAACTACGGCCGAGGGTGGAGGCCGAGGTGGTTTTTCCTCCATGACGGTGTTTTATCTTATTACAAAATCCATGGTCCTGATAAGCTTATTCTTAACCGTGACGTCGAGAAACGATCGAAAGTCATCGGAGACGAATCCCTCCGCCGTATCGCTAGCCACCGTCATTGTCCTTCCCGTCGTCAAAATCCTGTCAGTGAAATCCACCTAATGGTGTGTTCGGTGCGAGAGAACAAGTCGGACGAAAAGAGGTTTTGCATATGTACCGGGACGAAGAAGAGAATACATTTAAGAGCGGAGAGTAAAGAGGATAGAACAATGTGGATGGAAGCAATGATGACAGTGAAAACCATGTATCCTCGATTACCTACCACATCAGAAATCATGTCTCCTTCGGTTTCCGTCGTGATTTCGACCGATAAGTTGAGACAACGGCTTTTGCAAGAAGGTGTTAATGAAGTTTCTATCCGTGAATGTGAAGAAATCATGAGAACGGAGATGTTTCAGTTGCACACATACATTGTTGCCCTTAAAAAGAAACAATTGCTACTCACAGACACACTTCGTAATTTAGAGACTGAGAAGGTTGATTTGGAGAACACACTTGTCGAAGACCAGAGACAAACTAAGGATGAAGTGGATTCATATCTCTCATCACAAGAACGTTATAGTGATGGAAGTGGAAGTGAATATTCTGATGAGCATGATAGAGAGGATAACACAGACGACGAGCACGACGCATTCTTCGATACATACGAAATCCTTTCAGCGAGTTCAATTAGAAGTAATGGATCGTCTGATCATTTGAGATCCATCCAGGAATCTGAATCTGAGGAGACATCTAGTTCAACAGGAAAATGTGATCCTAAATCGACTACTGGATCAAACTATCCTTATATCGAGCGACGGAAGAAGTTACCTGATCCTGTTGAGAAAGAAACTGGAGTTAGTTTATGGTCAATAATAAAAGACAACATTGGAAAAGATCTTACAAAAGTTTGTCTTCCAGTTTATTTTAATGAGCCAATCTCTTCATTACAGAAATGTTTTGAAGATTTGGAGTACTCTCACCTTCTCGATCAAGCTTATGAATGTGGTAAAATGGGTGACAATCTAATGAGGATACTATACGTGGCTGCATTTGCAGTTTCGGGGTATGCAAACACTAATGGTAGAAGTTGTAAACCATTTAATCCGTTATTGGGTGAAACATATGAAGCTGATTATCCAGATAAAGGCATAAGATTTATCTCTGAGAAGGTGAGTCATCATCCTATGGTTTTAGCATGTCATTGTGAGGGTCGTGGTTGGAAATTTTGGGGTGATAGCAATTTAAAAAGTAAATTTTGGGGTCGATCGATTCAACTTGACCCTATTGGCTATTTAACCGTGGAGTTTGACGACGGTGAAGTCTTTTATTGGAGCAAGGTAACAACATCCATTTATAACCTAATTTTAGGAAAACTCTATTGCGATCATTATGGTACAATGAACATAGAGGGGAATCGTGAGCATTCGTGTAAGGTCAAATTCAAAGAGCAATCAATCATTGATAGAAACCCTCACCAGGTGCAAGGCATAGTTGAAGATAAGAATGGAAAAATAGCAGCAACTATATTTGGGAAGTGGGATGAGAGTTTGCATTACGTAATTGGAGCATTATCTGGAAAAGGAAAAAGGTCCAATATGTCACCGAAACCGCAAATGTTGTGGAAGAGAAACCAATTACCAGAGCACCAAACGAGATACAATTTTACAGAATTCGCATTTACATTAAATGAAATCACACCTGGTCTAAAGGAGAAGTTGCCGCCAACAGATTCAAGGCTAAGGCCTGATCAAAGATGTTTGGAGAATGGAGAATATGAAATGGCCAATTCTGAGAAGTTGAGATTGGAAACAAGACAACGACAGGCGAGAAACATGCAAGAGACAGGTTGGAAACCAAGATGGTTTGCTAAGGAAAATAACAGTAAGAGTTATCGTTATGTTGGTGGATATTGGGAGACTAGAGAAAAGGGAAAATGGGAAAATTGTGGTGATATTTTTGGCCAAATCACAGTTGGTGCTGATCAAGAATTTAACTCAACTGCATAA 2382 0.4139 MLSKKQVYANPDSHLPPMSSFRNTQKDDEPGSSTKNQMGPSFRSLSSCNRTGRTPSSSRAVQRSASARLARKNSSREVMLNDIVGDGISGILYKWVNYGRGWRPRWFFLHDGVLSYYKIHGPDKLILNRDVEKRSKVIGDESLRRIASHRHCPSRRQNPVSEIHLMVCSVRENKSDEKRFCICTGTKKRIHLRAESKEDRTMWMEAMMTVKTMYPRLPTTSEIMSPSVSVVISTDKLRQRLLQEGVNEVSIRECEEIMRTEMFQLHTYIVALKKKQLLLTDTLRNLETEKVDLENTLVEDQRQTKDEVDSYLSSQERYSDGSGSEYSDEHDREDNTDDEHDAFFDTYEILSASSIRSNGSSDHLRSIQESESEETSSSTGKCDPKSTTGSNYPYIERRKKLPDPVEKETGVSLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQAYECGKMGDNLMRILYVAAFAVSGYANTNGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMVLACHCEGRGWKFWGDSNLKSKFWGRSIQLDPIGYLTVEFDDGEVFYWSKVTTSIYNLILGKLYCDHYGTMNIEGNREHSCKVKFKEQSIIDRNPHQVQGIVEDKNGKIAATIFGKWDESLHYVIGALSGKGKRSNMSPKPQMLWKRNQLPEHQTRYNFTEFAFTLNEITPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLETRQRQARNMQETGWKPRWFAKENNSKSYRYVGGYWETREKGKWENCGDIFGQITVGADQEFNSTA 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02336 793 Pfam Pleckstrin homology domain 93 208 - -
Vivi3g02336 793 Gene3D - 498 679 - -
Vivi3g02336 793 MobiDBLite consensus disorder prediction 16 71 - -
Vivi3g02336 793 Coils Coil 283 303 - -
Vivi3g02336 793 SUPERFAMILY Oxysterol-binding protein-like 407 780 IPR037239 -
Vivi3g02336 793 Pfam Oxysterol-binding protein 412 767 IPR000648 GO:0008289
Vivi3g02336 793 FunFam Oxysterol-binding protein-related protein 2A 709 780 - -
Vivi3g02336 793 MobiDBLite consensus disorder prediction 356 394 - -
Vivi3g02336 793 Gene3D - 86 214 IPR011993 -
Vivi3g02336 793 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 88 766 IPR000648 GO:0008289
Vivi3g02336 793 ProSiteProfiles PH domain profile. 85 212 IPR001849 -
Vivi3g02336 793 SMART PH_update 86 214 IPR001849 -
Vivi3g02336 793 Gene3D - 709 776 - -
Vivi3g02336 793 FunFam oxysterol-binding protein-related protein 1D isoform X1 498 670 - -
Vivi3g02336 793 MobiDBLite consensus disorder prediction 302 338 - -
Vivi3g02336 793 MobiDBLite consensus disorder prediction 356 393 - -
Vivi3g02336 793 SUPERFAMILY PH domain-like 88 226 - -
Vivi3g02336 793 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02336 Vivi-Chr3 39337093 39341074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02336 K20456 - gmx:100781218 1144.03