Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02334 ATGAACTTTCCAAATCCAACTCATGCCACGTCATCTCCTTCTACTTCTTCCTCCTACACACTCACTCATGCTTCTCCGAATTTCAAGCGCCCTATGTTGTTGCCACAGGCAATCTGCACCTCACAAAAAAAGTCAATCTCCTCTGGAGCCCTTGTGGAGCCTTATGTTAACTCTAATCCTATGAAAAGTTACATAACTGCCGGTTTTTCTCCACGGCGATATGAAGCACAACCCTTGGTTTCTAGCCAATCACTCAACAAACATGTGTTCTCAGTGGAAGCCTTAGTAACTCGAACAGCTCAAGATGTTTCCGATACAACTCTTAATAGTGATGACAAGATTGGAGTGTTGTTGCTAAATCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAACCTTTTTTATTTAACCTTTTTGCTGACCCTGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTGTCTGTTCTAAGGGCCCCAAAAAGCAGAGAAGGCTATGCTTCAATTGGTGGCGGTTCTCCACTTCGACGTATAACTGATGAACAGGCTGAAGATTTGAAGAAATCTCTTTTTGCAAAGAATGTCCCCGCTGAAGTGTATGTTGGTATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAAAAAGATGGAATAACGAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGCATATTCCGAGAGGATGAGTATCTAGTCAACATGGAGCACACTGTATTACCTTCATGGTATCAACGTGAAGGGTACATAAAGGCCATGTCAAATTTAATCGAGAAAGAGCTGAAGAGTTTTGATTCCCCTAAGGAGGTCATGATATTCTTTAGTGCCCATGGGGTGCCGCTTGCTTATGTGGAAGAGGCTGGTGATCCTTACAAAGCAGAAATGGAAGAATGTGTGGATTTGATCATGGAAGAACTTGAGAGAAGAAAGATAACAAATGCTTACACCCTTGCCTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAGCCATATACGGACGTGACGATTGTTGAACTTGGAAAAAGGGGAGTGAAAAGTCTCTTGGCTGTTCCAATTAGCTTTGTGAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAAATGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTTCCTTCATCTCTGATTTGGCAGATGCTGTGATTGAAAGCCTCCCATATGTTGGTGCCATGGCAGTTTCAAACGTCAATGCACGACAGTCTTTGGTTCCGCTCGGCAGTGTAGAGGAGTTATTGGCAACATACGACTCACAACACAGGGAGTTGCCATCGCCGGTGATAGTGTGGCAATGGGGTTTGACAAAAAGTGCTGAAACATGGAATGGAAGAGTAGCTATGCTAGCTGTGCTGCTTCTTTTGTTTTTTGAAGTCACCACGCCTGATAGTGTTTTTCACCAGTGGGGAATATTAATGTCCTCTCTTAGGTGA 1584 0.4306 MNFPNPTHATSSPSTSSSYTLTHASPNFKRPMLLPQAICTSQKKSISSGALVEPYVNSNPMKSYITAGFSPRRYEAQPLVSSQSLNKHVFSVEALVTRTAQDVSDTTLNSDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDEQAEDLKKSLFAKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMEHTVLPSWYQREGYIKAMSNLIEKELKSFDSPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELERRKITNAYTLAYQSRVGPVEWLKPYTDVTIVELGKRGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNVNARQSLVPLGSVEELLATYDSQHRELPSPVIVWQWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQWGILMSSLR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02334 527 CDD Ferrochelatase_N 114 276 IPR033659 -
Vivi3g02334 527 SUPERFAMILY Chelatase 112 443 - -
Vivi3g02334 527 MobiDBLite consensus disorder prediction 1 22 - -
Vivi3g02334 527 Gene3D - 113 436 - -
Vivi3g02334 527 Gene3D - 275 418 - -
Vivi3g02334 527 ProSitePatterns Ferrochelatase signature. 303 324 IPR019772 GO:0004325|GO:0006783
Vivi3g02334 527 SUPERFAMILY Chlorophyll a-b binding protein 481 522 - -
Vivi3g02334 527 CDD Ferrochelatase_C 282 420 IPR033644 -
Vivi3g02334 527 PANTHER FERROCHELATASE 109 463 IPR001015 GO:0004325|GO:0006783
Vivi3g02334 527 Hamap Coproporphyrin III ferrochelatase [cpfC]. 112 437 IPR001015 GO:0004325|GO:0006783
Vivi3g02334 527 FunFam Ferrochelatase 113 291 - -
Vivi3g02334 527 Pfam Ferrochelatase 113 436 IPR001015 GO:0004325|GO:0006783
Vivi3g02334 527 NCBIfam ferrochelatase 111 437 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02334 Vivi-Chr3 39318174 39323334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02334 K01772 - gmx:100803481 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02334 3 39318174 39323334 Vivi3g02334 3 39318174 39323334 ECH