Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02318 ATGCAAGAATTCACTGTTGTAATTGTTGGTGGTGGTCCTTCTGGCCTAGCAATTTCAGCTTTACTAAGCCAAAACTCTATTTCTCACGTCATACTTGAAAAAGAGGAGTGCAATGCTTCTCTTTGGAGAAAAAATGCTTATGATCGTTTAAACCTCCATTTAGCTAGTGAGTTTTGCTCTTTACCTCTCATGCCACATCCATCCTCTAGCCCAACATACCTAACCAAAGACCAATTTCTTCAATACATAGATAAATATGTCGATCATTTTGACATAAGACCTCGTTATTATCGTGTCGTTGAGTCTGCTAAGTATGATGAAGTTAGAAACAAATGGGTTATTGAAGCAAAAAACACCATCGAAGGTACATTAGAAGTTTACGGCGCAAAGTTTCTTGTGATTGCCTCTGGTGAAAATAGTGAAGGTTTTATTCCTAATGTCTCTGGATTAGGACAATTTGAAGGAGAGGTGGTACACTCTAAGAACTACAAATCTGGTTCAAAATATAAATCAAAAGATGTTTTGGTTGTTGGGTGTGGTAACTCAGGAATGGAGATTGCATATGATCTCCATAACTGGGGTGCTAACACTTCCATTGTTATTCGAAATCCGCTTCATGTCTTCACGAGAAATATGATTCGTTTAGGGATGCGCTTGGTGCAATATGTTCCTGTTTATATAGTGGATACAATCATTACACTTCAAGCGAAATTCAAATATGGCGATCTGTCCAAATATGGGATTTATCGTCCTAAAGAAGGACCTTTGTATCTAAAAAACACTACTGGAAAATCTGCCGTTATTGATGTTGGAACCATTGAAAAAATTAAGGAAGGAGCTATAAAGGTTGTTCCTGCAGGTATAAAGAAAATTATGAAGAAGAATGTTATATTTGAAAACAATATGGAGAAAGAGTTTGATGCAATTATTTTTGCTACCGGTTATAAAAGTGTAGCTAATGAATGGCTAAAGGATTATAAATATGCTCTTAATGAAAAAGGGTTTCCTAAAAATCCTTTCCCAAAACATTGGAAGGGAGATCATGGATTGTATTGTGCTGGACTTGCAAGAAAAGGTTTGTTTGGAGTCAGAAAGGATGCTGAAGCAATTGCTGAAGACATAAACCAAACTTTTAAGTTGAAAAATTAA 1149 0.3603 MQEFTVVIVGGGPSGLAISALLSQNSISHVILEKEECNASLWRKNAYDRLNLHLASEFCSLPLMPHPSSSPTYLTKDQFLQYIDKYVDHFDIRPRYYRVVESAKYDEVRNKWVIEAKNTIEGTLEVYGAKFLVIASGENSEGFIPNVSGLGQFEGEVVHSKNYKSGSKYKSKDVLVVGCGNSGMEIAYDLHNWGANTSIVIRNPLHVFTRNMIRLGMRLVQYVPVYIVDTIITLQAKFKYGDLSKYGIYRPKEGPLYLKNTTGKSAVIDVGTIEKIKEGAIKVVPAGIKKIMKKNVIFENNMEKEFDAIIFATGYKSVANEWLKDYKYALNEKGFPKNPFPKHWKGDHGLYCAGLARKGLFGVRKDAEAIAEDINQTFKLKN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02318 382 Gene3D - 1 380 IPR036188 -
Vivi3g02318 382 SUPERFAMILY FAD/NAD(P)-binding domain 169 360 IPR036188 -
Vivi3g02318 382 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 204 - -
Vivi3g02318 382 PIRSF FMO 2 359 IPR000960 GO:0050660|GO:0050661
Vivi3g02318 382 SUPERFAMILY FAD/NAD(P)-binding domain 2 265 IPR036188 -
Vivi3g02318 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Vivi3g02318 382 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Vivi3g02318 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Vivi3g02318 382 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Vivi3g02318 382 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02318 Vivi-Chr3 38901750 38903087 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02318 K11816 - gmx:100778306 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02318 3 38901750 38903087 Vivi3g02318 3 38901750 38903087 ECH