Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02309 ATGGTGTTTTCTTCCAACCCTTTCGCGCTAAGCGTTCCCGAACCCGCCTTCGAATCCTGGCTTCGCGACACCGGCTACCTTGAAATCATCGACCAACGCACCACCGCCGTCGCCGAAGCCACCACCACCGTCAACTCTAACTCCTCCCCATTAGCACCCGTCACTTCCATCTCCTCCCGAATCCTAACCCTCTTATCCTTCGTCACTCTCAATCCCTTCGCCAAACTCACCGCCGATGATTTCTCCGGCGACACTCCTTCCTGGTCACGCTCTTTCGTCGGCTCCCCGTCGTCGTATTCCTTTCCTTCGAATCCATCACAAGCTCGCTTCCGTGTTCATGAAAATGTTAAGCGATATGCTCGGAACTATGCTTATCTCTTCGTCGTTTTCTTTGCTTCTTCACTGTATAAGATGCCACTTGCTCTTGTTGGGTTGATATCATGTTTGGCATTGTGGGATTTCTTCAAGTTCTTTAGTGAGAGATGGGGATTGGATCAATATCCTGTGGTTCGGCAGTGCTTGCTTCGTATTGCCCAATTTGCAACAGCAGTTATTCTAATATTTTCCAATGTTCAAATGGCTCTCTTCTGTGCCATAAGTGTCAGCTATGCAGGTGTGATACTGCATGCTGCTTTTCGGAAGTTGACCCCTGCACAGCGGCCTTCGGTGGTCAGAGGCGGATAG 684 0.5015 MVFSSNPFALSVPEPAFESWLRDTGYLEIIDQRTTAVAEATTTVNSNSSPLAPVTSISSRILTLLSFVTLNPFAKLTADDFSGDTPSWSRSFVGSPSSYSFPSNPSQARFRVHENVKRYARNYAYLFVVFFASSLYKMPLALVGLISCLALWDFFKFFSERWGLDQYPVVRQCLLRIAQFATAVILIFSNVQMALFCAISVSYAGVILHAAFRKLTPAQRPSVVRGG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02309 227 Pfam PRA1 family protein 91 214 IPR004895 -
Vivi3g02309 227 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 70 214 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02309 Vivi-Chr3 38468549 38470770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02309 - - qsa:O6P43_000987 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02309 3 38468549 38470770 Vivi3g02309 3 38468549 38470770 ECH