Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02308 ATGGCGTCATCTTCGCACGGCGGCGCTTCTGGTCGGATAAAGAACTTAGCTGCTACCTTCGGCTCTGATATTCAACCTTTCATTTCTGATATCCGAACAACAGTGGGCGTGATGAAGAATATTGCAGTTCAATTGGAAAAAGACAATCTTCCGGACAAGGTGAAGGAAATGGAAGATGCTGTTGTGGAGTTAGTTGAGTTATCTGAACACAGTGTGCATTTTTCATCTGCTGTTCAAGCTTTTGGTAATAGATACCAACCTGGAGAACAGTTGACTGATTTTCATAAGGTACTCGAAGATGAAATTTTGCAGTATAACGCCAATCGAAATTCAGATGTTCAAAAACACCCTTTAGTGCGGCAGTTTAAGGAAGCTGTATGGAAAGTGCATCATGAGGGACAGCCAATGCCAGGTGAAGAGGAGGAGGACATTGTAATGACCAGTACCCAATCTAATATTTTGAATTTTAAATGTCCATTGAGTGGAAAGCCTATTACTGAGCTTCAAGAACCAGTTCGCAGCATGCAATGCAGGCACATTTATGAAAAACAAGTGATAATGCAATATATCCAGTCGAAGAGTAACCGTACTCGATGCCCAATACCAGGTTGTCCAAAAGTGTTGGATGCAAATGTGCTGGTACAAGATCCATCGTTGGCTGTGGATATTGATGAAATGCGAAAAATGAACAGCAAAGAAACTAATGTAGAGGATTTCACCATGCTTGATGAAGATGAATGA 741 0.413 MASSSHGGASGRIKNLAATFGSDIQPFISDIRTTVGVMKNIAVQLEKDNLPDKVKEMEDAVVELVELSEHSVHFSSAVQAFGNRYQPGEQLTDFHKVLEDEILQYNANRNSDVQKHPLVRQFKEAVWKVHHEGQPMPGEEEEDIVMTSTQSNILNFKCPLSGKPITELQEPVRSMQCRHIYEKQVIMQYIQSKSNRTRCPIPGCPKVLDANVLVQDPSLAVDIDEMRKMNSKETNVEDFTMLDEDE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02308 246 Pfam Zinc-finger of the MIZ type in Nse subunit 143 204 IPR004181 GO:0008270
Vivi3g02308 246 CDD SPL-RING_NSE2 156 225 IPR004181 GO:0008270
Vivi3g02308 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 239 IPR013083 -
Vivi3g02308 246 PANTHER UNCHARACTERIZED 9 234 IPR026846 GO:0000724|GO:0019789|GO:0030915
Vivi3g02308 246 SUPERFAMILY RING/U-box 156 205 - -
Vivi3g02308 246 ProSiteProfiles Zinc finger SP-RING-type profile. 140 234 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02308 Vivi-Chr3 38461035 38464905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02308 K22756 - gmx:100804379 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02308 3 38461035 38464905 Vivi3g02308 3 38461035 38464905 ECH