Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02277 ATGAGTTCTAGAAGAGGTGGGAGGTCTTTTACTGCGGCCAGCAATGATGAAATTTCGTCCAAGGGGAAAGGTATTTCCCAATCTGATCCCAACTTTGAGCAGCTGACTCAAGGTGTTGCTGATGTTAACCTAGGCTCAGGACAAGATGACGACGGGCAATGGGAGGTCTATGGGAAGAAATCCAAGAACAGAGGTGGAGGTAATGCTGCAAAACAATGGGGTCCTCCAGCTCCAGCCTATACTTCTAACCCTAGAGGACGGGGATACACTGATGTAGCTCAAAGGCCAGGCCCACGTAATCCCGGTGGAGCTGGGAGAGGTGCTGGAAACCAATGGCAGACACCATATGTTAATAACAGGCCTGCTGGTAGAGGCAATGTAAGGCCTCTGTCAGCAACAGGTGGTTATGGATACAATGCGACTGCTAATCCAATCATTCGTCCTCCTCTGGAACATGGCTGGAACTGGCAATCTAGAGCTGGTGGAATGCAGACAAATGCAATGACTGAAATGTCACTACAGGAGTTTGAACAGAATAAAGACGATGAGGAGGAGGATGATGATGATGATGAGGGTGACTATGACTGCGATGATCTGGAAGATACTGATGATGATTTAATGAGTGATGAATATGATTCGGATGCCAGTCAAAAGAGCCATGAGACACGAAAGAAGAGCAAATGGTTCAGAAAATTCTTTGAGAATTTGGATAAACTGACTGTTGAAGAGATAAATGAACCTGAAAGACAGTGGCACTGTCCAGCTTGTCAACGTGGTCCTGGTGCTATTGATTGGTACAGAGGACTGCAGCCCCTTATGAATCATGCTAAAACAAAGGGTTCAAAAAGGGTGAAGGTTCACAGGGAGCTTGCTGTACTTCTTGACGAGGAATTGCGTAGAAGGGGCACTACAGTAGTTCCAGCTGGGGAAGCATTTGGAAAATGGAAAGGTTTGAAAGAAGAAGAGAAAGATCATGAAATAGTTTGGCCCCCGATGGTCATCATTCAGAATACTAGGCTTGAGCAAGATGATAATGAGAAGTGGTTAGGCATGGGCAACCAAGAGCTTCTTGATTATTTTAACTCTTATGCTGCTGTGAGAGCAAGGCACTCATATGGCCCTCAAGGTCATAGAGGGATGAGTGTTTTGATGTTTGAAGCCTCGGCTAGTGGTTATCTAGAGGCAGAACGTCTGCACAAACATTTTGCTGAGCAAGGAACGGATAAAGAGACTTGGTTTAGTAATCGCCGAATTTTGTTTCTCCCCGGTGGTAATCGACAGCTCTATGGATACCTGGCTACTACAGAAGACCTGGAGTTTTTCAACAGGCATTGCCAAGTTAAGAAGACTAGACTAAAGTATGAACTGAAATCATATCAAGAGATGGTTGTAAACCCAATCCGTCAGATGAGCGAGGACAACCAGCAGCTCAACTATTTCAAGAACAAGATGGTCAAAGAAAAGAAACACTCAAAAGCTATGGAAGAATCCTTTGGTCTTGTAACTGAGAAGCTGCGGAAAACAATGGAAGAGAATCGCATTGTCAGGCAGAGAACTAAACTGCAGCATGAGGAGATTAAAGAAGAGATGTACGCACAAGAACAATTCTTCAAGGAACAGATCACTAGCATCCATGATTCAAGGAATGAAAAAGAAGAAGACTTTGAAAGGATGCAGCAAGAGGAGCGTGAGAAGGTTAAGCAGTCAAGTACCACTCCTCTCAATGCAGAAGAACGTCGACTCAAGATGGAGGGATATGTGAAGTTTGTTGAAGTCCAGGAGAAGGAGATGGAGAACTTTGTTGAAGAAAAGGAAAAGCTCTTCCAAGCTCACGAGGAGAGCATTGCTGCTATGAGGCGGAGACACTGGGAGGAGGAGGTGGAGATGGAGAAGAAGTTTGATGAAGACTTAACCAAACTCATGAAGAAGTACTCCCCAACTCAGCAGTAG 1950 0.4492 MSSRRGGRSFTAASNDEISSKGKGISQSDPNFEQLTQGVADVNLGSGQDDDGQWEVYGKKSKNRGGGNAAKQWGPPAPAYTSNPRGRGYTDVAQRPGPRNPGGAGRGAGNQWQTPYVNNRPAGRGNVRPLSATGGYGYNATANPIIRPPLEHGWNWQSRAGGMQTNAMTEMSLQEFEQNKDDEEEDDDDDEGDYDCDDLEDTDDDLMSDEYDSDASQKSHETRKKSKWFRKFFENLDKLTVEEINEPERQWHCPACQRGPGAIDWYRGLQPLMNHAKTKGSKRVKVHRELAVLLDEELRRRGTTVVPAGEAFGKWKGLKEEEKDHEIVWPPMVIIQNTRLEQDDNEKWLGMGNQELLDYFNSYAAVRARHSYGPQGHRGMSVLMFEASASGYLEAERLHKHFAEQGTDKETWFSNRRILFLPGGNRQLYGYLATTEDLEFFNRHCQVKKTRLKYELKSYQEMVVNPIRQMSEDNQQLNYFKNKMVKEKKHSKAMEESFGLVTEKLRKTMEENRIVRQRTKLQHEEIKEEMYAQEQFFKEQITSIHDSRNEKEEDFERMQQEEREKVKQSSTTPLNAEERRLKMEGYVKFVEVQEKEMENFVEEKEKLFQAHEESIAAMRRRHWEEEVEMEKKFDEDLTKLMKKYSPTQQ 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02277 649 MobiDBLite consensus disorder prediction 177 210 - -
Vivi3g02277 649 MobiDBLite consensus disorder prediction 177 220 - -
Vivi3g02277 649 Pfam XS domain 324 439 IPR005380 GO:0031047
Vivi3g02277 649 Coils Coil 166 186 - -
Vivi3g02277 649 CDD RRM_like_XS 327 438 IPR005380 GO:0031047
Vivi3g02277 649 Coils Coil 590 621 - -
Vivi3g02277 649 MobiDBLite consensus disorder prediction 547 568 - -
Vivi3g02277 649 MobiDBLite consensus disorder prediction 547 573 - -
Vivi3g02277 649 Coils Coil 544 568 - -
Vivi3g02277 649 MobiDBLite consensus disorder prediction 1 132 - -
Vivi3g02277 649 Gene3D XS domain 319 499 IPR038588 -
Vivi3g02277 649 MobiDBLite consensus disorder prediction 1 43 - -
Vivi3g02277 649 Pfam XS zinc finger domain 253 291 IPR005381 GO:0031047
Vivi3g02277 649 PANTHER PROTEIN SUPPRESSOR OF GENE SILENCING 3 11 648 IPR044287 GO:0031047|GO:0051607
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02277 Vivi-Chr3 37512896 37517082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02277 - - gmx:100792019 893.649