Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02254 ATGGATCAAGAAGATAACGAACCCACGAGCAGGGAAGAGCAAGAAGAAGCATTAGTCGCTTTGATCGAACACCGAACTCACGAAGTCAGTTCTCTCCGAAAGCGTCTCGCTTATTACAAAACTCAGCTTGATGAAGCGGAAAACAGGTTGAAGGATTCAGAATCGAAATTGGCTCGGTTACGAGGTCAAAGTAATTCAGTTAAATCCGCAACTAGAAATGTAATTAACTTAGATAATGATGGTGGAGTTGTTGCTGTGAAGAAAGAGCGTAGATCAAATAGTCCTGTTGATAGGAATGAACGGTCTTACAAAAGCAATAATAATAACCATCAATCTAAAACTGAACTTGTTATTCCTACCGTTACTCCGAAGATTTCGCGGCCTTCGAAAGTTTCCAGTTCTGAATCTACTCCTTCGATTACGGGAGGAAAATCTGAAAAGTCTCGTAAAGAGCAGCAGGCTGTTGAAGTCAAGGAAAAAGTAACTAAAAGGAAACTTGAAGTGAAAGAACACAAGGAATTGATTCCTTTGATACGTAAGAGTTCTTCAGTGAAATTAATACACTGTGAAACAAGCAACCATATCCCAAGTCAGCACAAGAGGAAATTGCGGAGTATTGCTTTGTGTCCTGTGAATGATCAGCTTTTTGCGACCAGTGCCTTGGATGGAGTGGTCAACTTCTGGCAAGTACAAGCTAGAGGATCAGGAGCCTCTCTGTTTAACTCTTCTGATTGTGCATCCGAAAAACAGAGGAGATGGCCAGAAGATATAGCTTGGCACCCTGAAGGAAACAGGCTCTTTTCAGTTTATACTGCTGATGTTGGAGACTCACAAATATCAGTTACAAATCTGAATAAAGTACAAGGGCAACAACGTGTGAAATTCTTAGAGGGCAAGCCCCATTTGAAGGGAATTATCAATGGCATTGTTTTTATGCCCTGGGAAGATACATGCTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGCGTGAGCAGGATGATGAGGACAAATGGAAACCAAGACCATTGCACAGGAATCTTCATTCTTCTGCTGTTATGGGTGTTGCGGGTATGCAGCAGAAGCAGATTGTGTTATCTGCAGGTGCAGACAAGAGAATATTTGGGTTTGATGTTAGTGTAGGAAGAGCGGATTTCAGTCATCAGATTGATAGTAAATGCATGAGTGTCGTTCCCAATCCATGTGACTTCAACTTGTTTATGGTTCAAACAGGGACTCACGAGAAGCAGCTTCGACTATTTGATATTAGATTGAGGCGGACAGAACTTCACGCATTTGGGTGGAAGCAAGAAAGCAGTGAATCCCAGTCAGCTCTGATAAATCAAGCCTGGTCTCCTGATGGTCTTTATATAACATCTGGTTCAGCAGATCCTGTAATTCATATATTTGATATAAGATATAATACTAACAAGCCTTCCCAATCTATAAGAGCTCACCAGAAACGAGTCTTTGGGGCCATGTGGCTTCAGTCTATTCCTCTTCTCATATCCATATCATCTGATCTCAACATTGGGCTGCACAAGATTTACTAG 1557 0.4162 MDQEDNEPTSREEQEEALVALIEHRTHEVSSLRKRLAYYKTQLDEAENRLKDSESKLARLRGQSNSVKSATRNVINLDNDGGVVAVKKERRSNSPVDRNERSYKSNNNNHQSKTELVIPTVTPKISRPSKVSSSESTPSITGGKSEKSRKEQQAVEVKEKVTKRKLEVKEHKELIPLIRKSSSVKLIHCETSNHIPSQHKRKLRSIALCPVNDQLFATSALDGVVNFWQVQARGSGASLFNSSDCASEKQRRWPEDIAWHPEGNRLFSVYTADVGDSQISVTNLNKVQGQQRVKFLEGKPHLKGIINGIVFMPWEDTCFVTGGSDHAVVLWREQDDEDKWKPRPLHRNLHSSAVMGVAGMQQKQIVLSAGADKRIFGFDVSVGRADFSHQIDSKCMSVVPNPCDFNLFMVQTGTHEKQLRLFDIRLRRTELHAFGWKQESSESQSALINQAWSPDGLYITSGSADPVIHIFDIRYNTNKPSQSIRAHQKRVFGAMWLQSIPLLISISSDLNIGLHKIY 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02254 518 Gene3D - 84 393 IPR015943 GO:0005515
Vivi3g02254 518 MobiDBLite consensus disorder prediction 144 158 - -
Vivi3g02254 518 MobiDBLite consensus disorder prediction 83 98 - -
Vivi3g02254 518 Pfam WD domain, G-beta repeat 449 472 IPR001680 GO:0005515
Vivi3g02254 518 SMART WD40_4 477 516 IPR001680 GO:0005515
Vivi3g02254 518 SMART WD40_4 341 379 IPR001680 GO:0005515
Vivi3g02254 518 SMART WD40_4 435 472 IPR001680 GO:0005515
Vivi3g02254 518 SMART WD40_4 289 332 IPR001680 GO:0005515
Vivi3g02254 518 SMART WD40_4 188 229 IPR001680 GO:0005515
Vivi3g02254 518 MobiDBLite consensus disorder prediction 81 158 - -
Vivi3g02254 518 SUPERFAMILY WD40 repeat-like 202 514 IPR036322 GO:0005515
Vivi3g02254 518 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 6 517 - -
Vivi3g02254 518 Gene3D - 394 518 IPR015943 GO:0005515
Vivi3g02254 518 Coils Coil 29 63 - -
Vivi3g02254 518 MobiDBLite consensus disorder prediction 99 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02254 - - gmx:100799587 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02254 3 37124445 37137082 Vivi3g02254 3 37124445 37137082 ECH